{ "resourceType" : "Specimen", "id" : "AliquotgruppeBuffyCoat", "meta" : { "profile" : ["https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Specimen"] }, "language" : "en", "text" : { "status" : "extensions", "div" : "

English

Generated Narrative: Specimen AliquotgruppeBuffyCoat

Profile: MII PR Biobank Specimen Bioprobe

MII EX Biobank Ebene: MII CS Biobank Probenebene: ALIQUOTGRUPPE (Aliquotgruppe)

MII EX Biobank Anzahl Aliquots: 1

identifier: https://biobank.uk-musterstadt.de/fhir/sid/proben/12345-BC

status: Available

type: Buffy coat (specimen)

subject: Patient/mii-exa-test-data-patient-1

parent: Specimen: extension = Primärprobe (MII CS Biobank Probenebene#PRIMÄRPROBE),->Organization Mustersammlung; identifier = https://biobank.uk-musterstadt.de/fhir/sid/proben#12345; status = available; type = Venous blood specimen (specimen); receivedTime = 2018-06-07 15:50:00+0100

Collections

-Collected[x]
*2018-06-07 15:54:00+0100

processing

MII EX Biobank Temperaturbedingungen: 15-25 °C

Sample storage temperature: Room temperature

procedure: Storage of specimen (procedure)

time: 2018-06-07 16:37:00+0100 --> 2018-06-07 17:07:00+0100

processing

MII EX Biobank Temperaturbedingungen: -196--150 °C

Sample storage temperature: liquid nitrogen, -150 to -196 degrees Celsius

procedure: Storage of specimen (procedure)

time: 2018-06-07 17:07:00+0100 --> (ongoing)

Containers

-TypeCapacitySpecimenQuantity
*Tube, device (physical object)2 ml (Details: UCUM codeml = 'ml')0.2 ml (Details: UCUM codeml = 'ml')

note:

Buffy-Coat Aliquots für Genomik-Analysen

\n
" }, "extension" : [{ "url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-ebene", "valueCoding" : { "system" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/CodeSystem/mii-cs-biobank-probenebene", "code" : "ALIQUOTGRUPPE", "display" : "Aliquotgruppe" } }, { "url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-anzahl-aliquots", "valueInteger" : 1 }], "identifier" : [{ "system" : "https://biobank.uk-musterstadt.de/fhir/sid/proben", "value" : "12345-BC" }], "status" : "available", "type" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "258587000", "display" : "Buffy coat (specimen)" }, { "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs", "code" : "BuffyCoat", "display" : "Buffy coat" }] }, "subject" : { "reference" : "Patient/mii-exa-test-data-patient-1" }, "parent" : [{ "reference" : "Specimen/MusterprobeFluessig" }], "collection" : { "collectedDateTime" : "2018-06-07T15:54:00+01:00" }, "processing" : [{ "extension" : [{ "url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen", "valueRange" : { "low" : { "value" : 15, "unit" : "°C", "system" : "http://unitsofmeasure.org", "code" : "Cel" }, "high" : { "value" : 25, "unit" : "°C", "system" : "http://unitsofmeasure.org", "code" : "Cel" } } }, { "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-storage-temperature-extension", "valueCodeableConcept" : { "coding" : [{ "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs", "code" : "RT", "display" : "Room temperature" }] } }], "procedure" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "1186936003", "display" : "Storage of specimen (procedure)" }] }, "timePeriod" : { "start" : "2018-06-07T16:37:00+01:00", "end" : "2018-06-07T17:07:00+01:00" } }, { "extension" : [{ "url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen", "valueRange" : { "low" : { "value" : -196, "unit" : "°C", "system" : "http://unitsofmeasure.org", "code" : "Cel" }, "high" : { "value" : -150, "unit" : "°C", "system" : "http://unitsofmeasure.org", "code" : "Cel" } } }, { "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-storage-temperature-extension", "valueCodeableConcept" : { "coding" : [{ "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs", "code" : "LN" }] } }], "procedure" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "1186936003", "display" : "Storage of specimen (procedure)" }] }, "timePeriod" : { "start" : "2018-06-07T17:07:00+01:00" } }], "container" : [{ "type" : { "coding" : [{ "system" : "http://snomed.info/sct", "code" : "83059008", "display" : "Tube, device (physical object)" }] }, "capacity" : { "value" : 2, "unit" : "ml", "system" : "http://unitsofmeasure.org", "code" : "ml" }, "specimenQuantity" : { "value" : 0.2, "unit" : "ml", "system" : "http://unitsofmeasure.org", "code" : "ml" } }], "note" : [{ "text" : "Buffy-Coat Aliquots für Genomik-Analysen" }] }