MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
MII IG Kerndatensatz-Modul Biobank - Downloaded Version 2027.0.0-ballot See the Directory of published versions
{
"resourceType" : "Specimen",
"id" : "AliquotgruppeBuffyCoat",
"meta" : {
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🔗 "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Specimen"
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"language" : "en",
"text" : {
"status" : "extensions",
"div" : "<div xml:lang=\"en\" lang=\"en\"><hr/><p><b>English</b></p><hr/><p class=\"res-header-id\"><b>Generated Narrative: Specimen AliquotgruppeBuffyCoat</b></p><a name=\"AliquotgruppeBuffyCoat\"> </a><a name=\"hcAliquotgruppeBuffyCoat\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-mii-pr-biobank-specimen.html\">MII PR Biobank Specimen Bioprobe</a></p></div><p><b>MII EX Biobank Ebene</b>: <a href=\"CodeSystem-mii-cs-biobank-probenebene.html#mii-cs-biobank-probenebene-ALIQUOTGRUPPE\">MII CS Biobank Probenebene: ALIQUOTGRUPPE</a> (Aliquotgruppe)</p><p><b>MII EX Biobank Anzahl Aliquots</b>: 1</p><p><b>identifier</b>: <code>https://biobank.uk-musterstadt.de/fhir/sid/proben</code>/12345-BC</p><p><b>status</b>: Available</p><p><b>type</b>: <span title=\"Codes:{http://snomed.info/sct 258587000}, {https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs BuffyCoat}\">Buffy coat (specimen)</span></p><p><b>subject</b>: <a href=\"https://simplifier.net/resolve?scope=de.basisprofil.r4@1.6.0&canonical=http://fhir.org/packages/de.basisprofil.r4/Patient/mii-exa-test-data-patient-1\">Patient/mii-exa-test-data-patient-1</a></p><p><b>parent</b>: <a href=\"Specimen-MusterprobeFluessig.html\">Specimen: extension = Primärprobe (MII CS Biobank Probenebene#PRIMÄRPROBE),->Organization Mustersammlung; identifier = https://biobank.uk-musterstadt.de/fhir/sid/proben#12345; status = available; type = Venous blood specimen (specimen); receivedTime = 2018-06-07 15:50:00+0100</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td></tr><tr><td style=\"display: none\">*</td><td>2018-06-07 15:54:00+0100</td></tr></table><blockquote><p><b>processing</b></p><p><b>MII EX Biobank Temperaturbedingungen</b>: 15-25 °C</p><p><b>Sample storage temperature</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs RT}\">Room temperature</span></p><p><b>procedure</b>: <span title=\"Codes:{http://snomed.info/sct 1186936003}\">Storage of specimen (procedure)</span></p><p><b>time</b>: 2018-06-07 16:37:00+0100 --> 2018-06-07 17:07:00+0100</p></blockquote><blockquote><p><b>processing</b></p><p><b>MII EX Biobank Temperaturbedingungen</b>: -196--150 °C</p><p><b>Sample storage temperature</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs LN}\">liquid nitrogen, -150 to -196 degrees Celsius</span></p><p><b>procedure</b>: <span title=\"Codes:{http://snomed.info/sct 1186936003}\">Storage of specimen (procedure)</span></p><p><b>time</b>: 2018-06-07 17:07:00+0100 --> (ongoing)</p></blockquote><h3>Containers</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Type</b></td><td><b>Capacity</b></td><td><b>SpecimenQuantity</b></td></tr><tr><td style=\"display: none\">*</td><td><span title=\"Codes:{http://snomed.info/sct 83059008}\">Tube, device (physical object)</span></td><td>2 ml<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM codeml = 'ml')</span></td><td>0.2 ml<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM codeml = 'ml')</span></td></tr></table><p><b>note</b>: </p><blockquote><div><p>Buffy-Coat Aliquots für Genomik-Analysen</p>\n</div></blockquote></div>"
},
"extension" : [
{
"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-ebene",
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"system" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/CodeSystem/mii-cs-biobank-probenebene",
"code" : "ALIQUOTGRUPPE",
"display" : "Aliquotgruppe"
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{
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"valueInteger" : 1
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"identifier" : [
{
"system" : "https://biobank.uk-musterstadt.de/fhir/sid/proben",
"value" : "12345-BC"
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"status" : "available",
"type" : {
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"display" : "Buffy coat (specimen)"
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"subject" : {
"reference" : "Patient/mii-exa-test-data-patient-1"
},
"parent" : [
{
🔗 "reference" : "Specimen/MusterprobeFluessig"
}
],
"collection" : {
"collectedDateTime" : "2018-06-07T15:54:00+01:00"
},
"processing" : [
{
"extension" : [
{
"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen",
"valueRange" : {
"low" : {
"value" : 15,
"unit" : "°C",
"system" : "http://unitsofmeasure.org",
"code" : "Cel"
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"value" : 25,
"unit" : "°C",
"system" : "http://unitsofmeasure.org",
"code" : "Cel"
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}
},
{
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"valueCodeableConcept" : {
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"display" : "Storage of specimen (procedure)"
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"timePeriod" : {
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"end" : "2018-06-07T17:07:00+01:00"
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{
"extension" : [
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"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen",
"valueRange" : {
"low" : {
"value" : -196,
"unit" : "°C",
"system" : "http://unitsofmeasure.org",
"code" : "Cel"
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"high" : {
"value" : -150,
"unit" : "°C",
"system" : "http://unitsofmeasure.org",
"code" : "Cel"
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{
"url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-storage-temperature-extension",
"valueCodeableConcept" : {
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"container" : [
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"capacity" : {
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"unit" : "ml",
"system" : "http://unitsofmeasure.org",
"code" : "ml"
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"specimenQuantity" : {
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"unit" : "ml",
"system" : "http://unitsofmeasure.org",
"code" : "ml"
}
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],
"note" : [
{
"text" : "Buffy-Coat Aliquots für Genomik-Analysen"
}
]
}