{ "resourceType" : "StructureDefinition", "id" : "dnpm-lm-ngs-report", "language" : "en", "text" : { "status" : "extensions", "div" : "

English

Generated Narrative: StructureDefinition dnpm-lm-ngs-report

\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n
NameFlagsCard.TypeDescription & Constraints\"doco\"
\".\"\".\" dnpm-lm-ngs-report 0..*ElementDNPM NGS Report

Elements defined in Ancestors:@id, extension
\".\"\".\"\".\" dnpmId 1..1stringNGS Report UUID (DNPM internal ID)
\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\" type 1..1stringReference type (Patient)
\".\"\".\"\".\" specimen 1..1BackboneElementTumor specimen reference
\".\"\".\"\".\"\".\" @id 1..1stringSpecimen ID
\".\"\".\"\".\"\".\" type 1..1stringReference type (TumorSpecimen)
\".\"\".\"\".\" issuedOn 1..1stringReport issue date (YYYY-MM-DD)
\".\"\".\"\".\" type 1..1BackboneElementNGS analysis type (e.g. exome, panel)
\".\"\".\"\".\"\".\" code 1..1stringType code
\".\"\".\"\".\"\".\" display 0..1stringType display
\".\"\".\"\".\"\".\" system 1..1stringType system URI
\".\"\".\"\".\" metadata 0..1BackboneElementNGS run metadata
\".\"\".\"\".\"\".\" referenceGenome 0..1BackboneElementReference genome used
\".\"\".\"\".\"\".\"\".\" code 1..1stringGenome build code (e.g. GRCh38)
\".\"\".\"\".\"\".\"\".\" display 0..1stringGenome build display
\".\"\".\"\".\"\".\"\".\" system 1..1stringGenome build system URI
\".\"\".\"\".\"\".\" sequencer 0..1BackboneElementSequencer instrument
\".\"\".\"\".\"\".\"\".\" code 1..1stringSequencer code
\".\"\".\"\".\"\".\"\".\" display 0..1stringSequencer display
\".\"\".\"\".\"\".\"\".\" system 1..1stringSequencer system URI
\".\"\".\"\".\"\".\" kitManufacturer 0..1stringKit manufacturer name
\".\"\".\"\".\"\".\" kitType 0..1stringKit type name
\".\"\".\"\".\"\".\" pipeline 0..1stringBioinformatics pipeline identifier
\".\"\".\"\".\"\".\" tumorCellContent 0..1BackboneElementTumor cell content metadata estimate
\".\"\".\"\".\"\".\"\".\" method 0..1BackboneElementEstimation method
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringMethod code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringMethod display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringMethod system URI
\".\"\".\"\".\"\".\"\".\" value 1..1decimalTumor cell content fraction (0.0 – 1.0)
\".\"\".\"\".\" results 1..1BackboneElementNGS analysis results
\".\"\".\"\".\"\".\" tumorCellContent 0..1BackboneElementBioinformatically determined tumor cell content
\".\"\".\"\".\"\".\"\".\" @id 1..1stringResult ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" specimen 1..1BackboneElementSpecimen reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringSpecimen ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" method 1..1BackboneElementDetermination method
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringMethod code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringMethod display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringMethod system URI
\".\"\".\"\".\"\".\"\".\" value 1..1decimalTumor cell content fraction (0.0 – 1.0)
\".\"\".\"\".\"\".\" tmb 0..1BackboneElementTumor Mutational Burden
\".\"\".\"\".\"\".\"\".\" @id 1..1stringTMB result ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" specimen 1..1BackboneElementSpecimen reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringSpecimen ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" value 1..1BackboneElementTMB quantity
\".\"\".\"\".\"\".\"\".\"\".\" value 1..1decimalNumeric TMB value
\".\"\".\"\".\"\".\"\".\"\".\" unit 1..1stringUnit (e.g. Mutations per megabase)
\".\"\".\"\".\"\".\"\".\" interpretation 0..1BackboneElementTMB interpretation
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringInterpretation code (e.g. high)
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringInterpretation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringInterpretation system URI
\".\"\".\"\".\"\".\" brcaness 0..1BackboneElementBRCAness score
\".\"\".\"\".\"\".\"\".\" @id 1..1stringBRCAness result ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" specimen 1..1BackboneElementSpecimen reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringSpecimen ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" value 1..1decimalBRCAness score (0.0 – 1.0)
\".\"\".\"\".\"\".\"\".\" confidenceRange 0..1BackboneElementConfidence range
\".\"\".\"\".\"\".\"\".\"\".\" min 1..1decimalMinimum confidence value
\".\"\".\"\".\"\".\"\".\"\".\" max 1..1decimalMaximum confidence value
\".\"\".\"\".\"\".\" hrdScore 0..1BackboneElementHomologous Recombination Deficiency Score
\".\"\".\"\".\"\".\"\".\" @id 1..1stringHRD result ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" specimen 1..1BackboneElementSpecimen reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringSpecimen ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" value 1..1decimalHRD composite score
\".\"\".\"\".\"\".\"\".\" components 0..1BackboneElementHRD component scores
\".\"\".\"\".\"\".\"\".\"\".\" lst 0..1decimalLarge-scale state transitions (LST)
\".\"\".\"\".\"\".\"\".\"\".\" loh 0..1decimalLoss of heterozygosity (LOH)
\".\"\".\"\".\"\".\"\".\"\".\" tai 0..1decimalTelomeric allelic imbalance (TAI)
\".\"\".\"\".\"\".\"\".\" interpretation 0..1BackboneElementHRD interpretation
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringInterpretation code (e.g. low)
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringInterpretation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringInterpretation system URI
\".\"\".\"\".\"\".\" simpleVariants 0..*BackboneElementSimple variants (SNV / small indels)
\".\"\".\"\".\"\".\"\".\" @id 1..1stringVariant ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" externalIds 0..*BackboneElementExternal variant identifiers (e.g. dbSNP rs-number)
\".\"\".\"\".\"\".\"\".\"\".\" value 1..1stringIdentifier value
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringIdentifier system URI
\".\"\".\"\".\"\".\"\".\" chromosome 1..1stringChromosome (e.g. chr4)
\".\"\".\"\".\"\".\"\".\" gene 1..1BackboneElementAffected gene
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringHGNC gene code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringGene symbol
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringGene nomenclature system URI
\".\"\".\"\".\"\".\"\".\" localization 0..*BackboneElementVariant localisation in gene
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringLocalisation code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringLocalisation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringLocalisation system URI
\".\"\".\"\".\"\".\"\".\" transcriptId 0..1BackboneElementTranscript identifier
\".\"\".\"\".\"\".\"\".\"\".\" value 1..1stringTranscript ID value (e.g. ENST...)
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringTranscript system URI
\".\"\".\"\".\"\".\"\".\" exonId 0..1stringExon identifier
\".\"\".\"\".\"\".\"\".\" position 0..1BackboneElementGenomic position (1-based)
\".\"\".\"\".\"\".\"\".\"\".\" start 1..1integerStart position
\".\"\".\"\".\"\".\"\".\"\".\" end 0..1integerEnd position
\".\"\".\"\".\"\".\"\".\" altAllele 1..1stringAlternate allele
\".\"\".\"\".\"\".\"\".\" refAllele 1..1stringReference allele
\".\"\".\"\".\"\".\"\".\" dnaChange 0..1stringcDNA / DNA change in HGVS notation (e.g. c.570G>T)
\".\"\".\"\".\"\".\"\".\" proteinChange 0..1stringProtein change in HGVS notation (e.g. p.(Glu125Asp))
\".\"\".\"\".\"\".\"\".\" readDepth 0..1integerRead depth at variant position
\".\"\".\"\".\"\".\"\".\" allelicFrequency 0..1decimalVariant allelic frequency
\".\"\".\"\".\"\".\"\".\" interpretation 0..1BackboneElementClinVar / clinical interpretation
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringInterpretation code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringInterpretation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringInterpretation system URI
\".\"\".\"\".\"\".\" copyNumberVariants 0..*BackboneElementCopy number variants (CNV)
\".\"\".\"\".\"\".\"\".\" @id 1..1stringCNV ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" chromosome 1..1stringChromosome (e.g. chr7)
\".\"\".\"\".\"\".\"\".\" localization 0..*BackboneElementCNV localisation
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringLocalisation code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringLocalisation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringLocalisation system URI
\".\"\".\"\".\"\".\"\".\" startRange 0..1BackboneElementStart position range
\".\"\".\"\".\"\".\"\".\"\".\" start 1..1integerRange start
\".\"\".\"\".\"\".\"\".\"\".\" end 1..1integerRange end
\".\"\".\"\".\"\".\"\".\" endRange 0..1BackboneElementEnd position range
\".\"\".\"\".\"\".\"\".\"\".\" start 1..1integerRange start
\".\"\".\"\".\"\".\"\".\"\".\" end 1..1integerRange end
\".\"\".\"\".\"\".\"\".\" totalCopyNumber 0..1integerTotal copy number
\".\"\".\"\".\"\".\"\".\" relativeCopyNumber 0..1decimalRelative copy number
\".\"\".\"\".\"\".\"\".\" cnA 0..1integerCopy number allele A
\".\"\".\"\".\"\".\"\".\" cnB 0..1integerCopy number allele B
\".\"\".\"\".\"\".\"\".\" reportedAffectedGenes 0..*BackboneElementReported affected genes
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringHGNC gene code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringGene symbol
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringGene nomenclature system URI
\".\"\".\"\".\"\".\"\".\" focality 0..1BackboneElementCNV focality
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringFocality code (e.g. focal)
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringFocality display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringFocality system URI
\".\"\".\"\".\"\".\"\".\" type 1..1BackboneElementCNV type (gain / loss)
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringCNV type code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringCNV type display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringCNV type system URI
\".\"\".\"\".\"\".\" dnaFusions 0..*BackboneElementDNA-level gene fusions
\".\"\".\"\".\"\".\"\".\" @id 1..1stringDNA fusion ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" localization 0..*BackboneElementFusion localisation
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringLocalisation code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringLocalisation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringLocalisation system URI
\".\"\".\"\".\"\".\"\".\" fusionPartner5prime 0..1BackboneElement5-prime fusion partner
\".\"\".\"\".\"\".\"\".\"\".\" gene 1..1BackboneElement5-prime partner gene
\".\"\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringHGNC gene code
\".\"\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringGene symbol
\".\"\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringGene nomenclature system URI
\".\"\".\"\".\"\".\"\".\"\".\" position 1..1integerBreakpoint position
\".\"\".\"\".\"\".\"\".\" fusionPartner3prime 0..1BackboneElement3-prime fusion partner
\".\"\".\"\".\"\".\"\".\"\".\" gene 1..1BackboneElement3-prime partner gene
\".\"\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringHGNC gene code
\".\"\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringGene symbol
\".\"\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringGene nomenclature system URI
\".\"\".\"\".\"\".\"\".\"\".\" position 1..1integerBreakpoint position
\".\"\".\"\".\"\".\"\".\" reportedNumReads 0..1integerNumber of reads supporting fusion
\".\"\".\"\".\"\".\" rnaFusions 0..*BackboneElementRNA-level gene fusions
\".\"\".\"\".\"\".\"\".\" @id 1..1stringRNA fusion ID
\".\"\".\"\".\"\".\"\".\" patient 1..1BackboneElementPatient reference
\".\"\".\"\".\"\".\"\".\"\".\" @id 1..1stringPatient ID
\".\"\".\"\".\"\".\"\".\"\".\" type 1..1stringReference type
\".\"\".\"\".\"\".\"\".\" externalIds 0..*BackboneElementExternal identifiers (e.g. COSMIC fusion ID)
\".\"\".\"\".\"\".\"\".\"\".\" value 1..1stringIdentifier value
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringIdentifier system URI
\".\"\".\"\".\"\".\"\".\" localization 0..*BackboneElementFusion localisation
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringLocalisation code
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringLocalisation display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringLocalisation system URI
\".\"\".\"\".\"\".\"\".\" fusionPartner5prime 0..1BackboneElement5-prime fusion partner
\".\"\".\"\".\"\".\"\".\"\".\" gene 1..1BackboneElement5-prime partner gene
\".\"\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringHGNC gene code
\".\"\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringGene symbol
\".\"\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringGene nomenclature system URI
\".\"\".\"\".\"\".\"\".\"\".\" transcript 0..1BackboneElement5-prime transcript
\".\"\".\"\".\"\".\"\".\"\".\"\".\" value 1..1stringTranscript ID (e.g. ENST...)
\".\"\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringTranscript system URI
\".\"\".\"\".\"\".\"\".\"\".\" exon 0..1stringExon identifier
\".\"\".\"\".\"\".\"\".\"\".\" position 1..1integerBreakpoint position
\".\"\".\"\".\"\".\"\".\"\".\" strand 0..1stringStrand (+ or -)
\".\"\".\"\".\"\".\"\".\" fusionPartner3prime 0..1BackboneElement3-prime fusion partner
\".\"\".\"\".\"\".\"\".\"\".\" gene 1..1BackboneElement3-prime partner gene
\".\"\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringHGNC gene code
\".\"\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringGene symbol
\".\"\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringGene nomenclature system URI
\".\"\".\"\".\"\".\"\".\"\".\" transcript 0..1BackboneElement3-prime transcript
\".\"\".\"\".\"\".\"\".\"\".\"\".\" value 1..1stringTranscript ID (e.g. ENST...)
\".\"\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringTranscript system URI
\".\"\".\"\".\"\".\"\".\"\".\" exon 0..1stringExon identifier
\".\"\".\"\".\"\".\"\".\"\".\" position 1..1integerBreakpoint position
\".\"\".\"\".\"\".\"\".\"\".\" strand 0..1stringStrand (+ or -)
\".\"\".\"\".\"\".\"\".\" effect 0..1BackboneElementRNA fusion effect
\".\"\".\"\".\"\".\"\".\"\".\" code 1..1stringEffect code (e.g. in-frame)
\".\"\".\"\".\"\".\"\".\"\".\" display 0..1stringEffect display
\".\"\".\"\".\"\".\"\".\"\".\" system 1..1stringEffect system URI
\".\"\".\"\".\"\".\"\".\" reportedNumReads 0..1integerNumber of reads supporting fusion

\"doco\" Documentation for this format
" }, "url" : "https://dnpm-dip.net/fhir/StructureDefinition/dnpm-lm-ngs-report", "version" : "2027.0.0-ballot.1", "name" : "DNPM_LM_NGSReport", "title" : "DNPM NGS Report", "status" : "active", "date" : "2026-09-15T17:39:31+00:00", "publisher" : "Medizininformatik-Initiative", "contact" : [{ "name" : "Medizininformatik-Initiative", "telecom" : [{ "system" : "url", "value" : "https://www.medizininformatik-initiative.de" }] }], "description" : "Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array", "jurisdiction" : [{ "coding" : [{ "system" : "urn:iso:std:iso:3166", "code" : "DE", "display" : "Germany" }] }], "fhirVersion" : "4.0.1", "kind" : "logical", "abstract" : false, "type" : "https://dnpm-dip.net/fhir/StructureDefinition/dnpm-lm-ngs-report", "baseDefinition" : "http://hl7.org/fhir/StructureDefinition/Element", "derivation" : "specialization", "snapshot" : { "extension" : [{ "url" : "http://hl7.org/fhir/tools/StructureDefinition/snapshot-base-version", "valueString" : "4.0.1" }], "element" : [{ "id" : "dnpm-lm-ngs-report", "path" : "dnpm-lm-ngs-report", "short" : "DNPM NGS Report", "definition" : "Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array", "min" : 0, "max" : "*", "base" : { "path" : "Element", "min" : 0, "max" : "*" }, "condition" : ["ele-1"], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }], "isModifier" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.id", "path" : "dnpm-lm-ngs-report.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.extension", "path" : "dnpm-lm-ngs-report.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.dnpmId", "path" : "dnpm-lm-ngs-report.dnpmId", "short" : "NGS Report UUID (DNPM internal ID)", "definition" : "NGS Report UUID (DNPM internal ID)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.dnpmId", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.patient", "path" : "dnpm-lm-ngs-report.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.patient.id", "path" : "dnpm-lm-ngs-report.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.patient.extension", "path" : "dnpm-lm-ngs-report.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.patient.type", "path" : "dnpm-lm-ngs-report.patient.type", "short" : "Reference type (Patient)", "definition" : "Reference type (Patient)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.specimen", "path" : "dnpm-lm-ngs-report.specimen", "short" : "Tumor specimen reference", "definition" : "Tumor specimen reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.specimen", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.specimen.id", "path" : "dnpm-lm-ngs-report.specimen.id", "representation" : ["xmlAttr"], "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.specimen.extension", "path" : "dnpm-lm-ngs-report.specimen.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.specimen.modifierExtension", "path" : "dnpm-lm-ngs-report.specimen.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.specimen.type", "path" : "dnpm-lm-ngs-report.specimen.type", "short" : "Reference type (TumorSpecimen)", "definition" : "Reference type (TumorSpecimen)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.specimen.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.issuedOn", "path" : "dnpm-lm-ngs-report.issuedOn", "short" : "Report issue date (YYYY-MM-DD)", "definition" : "Report issue date (YYYY-MM-DD)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.issuedOn", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.type", "path" : "dnpm-lm-ngs-report.type", "short" : "NGS analysis type (e.g. exome, panel)", "definition" : "NGS analysis type (e.g. exome, panel)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.type.id", "path" : "dnpm-lm-ngs-report.type.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.type.extension", "path" : "dnpm-lm-ngs-report.type.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.type.modifierExtension", "path" : "dnpm-lm-ngs-report.type.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.type.code", "path" : "dnpm-lm-ngs-report.type.code", "short" : "Type code", "definition" : "Type code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.type.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.type.display", "path" : "dnpm-lm-ngs-report.type.display", "short" : "Type display", "definition" : "Type display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.type.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.type.system", "path" : "dnpm-lm-ngs-report.type.system", "short" : "Type system URI", "definition" : "Type system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.type.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata", "path" : "dnpm-lm-ngs-report.metadata", "short" : "NGS run metadata", "definition" : "NGS run metadata", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.metadata.id", "path" : "dnpm-lm-ngs-report.metadata.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.extension", "path" : "dnpm-lm-ngs-report.metadata.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.modifierExtension", "path" : "dnpm-lm-ngs-report.metadata.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome", "short" : "Reference genome used", "definition" : "Reference genome used", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.referenceGenome", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.id", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.extension", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.modifierExtension", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.code", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.code", "short" : "Genome build code (e.g. GRCh38)", "definition" : "Genome build code (e.g. GRCh38)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.display", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.display", "short" : "Genome build display", "definition" : "Genome build display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.system", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.system", "short" : "Genome build system URI", "definition" : "Genome build system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer", "path" : "dnpm-lm-ngs-report.metadata.sequencer", "short" : "Sequencer instrument", "definition" : "Sequencer instrument", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.sequencer", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.id", "path" : "dnpm-lm-ngs-report.metadata.sequencer.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.extension", "path" : "dnpm-lm-ngs-report.metadata.sequencer.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.modifierExtension", "path" : "dnpm-lm-ngs-report.metadata.sequencer.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.code", "path" : "dnpm-lm-ngs-report.metadata.sequencer.code", "short" : "Sequencer code", "definition" : "Sequencer code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.sequencer.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.display", "path" : "dnpm-lm-ngs-report.metadata.sequencer.display", "short" : "Sequencer display", "definition" : "Sequencer display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.sequencer.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.system", "path" : "dnpm-lm-ngs-report.metadata.sequencer.system", "short" : "Sequencer system URI", "definition" : "Sequencer system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.sequencer.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.kitManufacturer", "path" : "dnpm-lm-ngs-report.metadata.kitManufacturer", "short" : "Kit manufacturer name", "definition" : "Kit manufacturer name", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.kitManufacturer", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.kitType", "path" : "dnpm-lm-ngs-report.metadata.kitType", "short" : "Kit type name", "definition" : "Kit type name", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.kitType", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.pipeline", "path" : "dnpm-lm-ngs-report.metadata.pipeline", "short" : "Bioinformatics pipeline identifier", "definition" : "Bioinformatics pipeline identifier", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.pipeline", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent", "short" : "Tumor cell content metadata estimate", "definition" : "Tumor cell content metadata estimate", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.id", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.extension", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.modifierExtension", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method", "short" : "Estimation method", "definition" : "Estimation method", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.id", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.extension", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.modifierExtension", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code", "short" : "Method code", "definition" : "Method code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display", "short" : "Method display", "definition" : "Method display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system", "short" : "Method system URI", "definition" : "Method system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.value", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.value", "short" : "Tumor cell content fraction (0.0 – 1.0)", "definition" : "Tumor cell content fraction (0.0 – 1.0)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results", "path" : "dnpm-lm-ngs-report.results", "short" : "NGS analysis results", "definition" : "NGS analysis results", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.id", "path" : "dnpm-lm-ngs-report.results.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.extension", "path" : "dnpm-lm-ngs-report.results.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.modifierExtension", "path" : "dnpm-lm-ngs-report.results.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent", "path" : "dnpm-lm-ngs-report.results.tumorCellContent", "short" : "Bioinformatically determined tumor cell content", "definition" : "Bioinformatically determined tumor cell content", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.id", "representation" : ["xmlAttr"], "short" : "Result ID", "definition" : "Result ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.extension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.extension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.type", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.id", "representation" : ["xmlAttr"], "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.extension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method", "short" : "Determination method", "definition" : "Determination method", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.extension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.code", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.code", "short" : "Method code", "definition" : "Method code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.display", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.display", "short" : "Method display", "definition" : "Method display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.system", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.system", "short" : "Method system URI", "definition" : "Method system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.value", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.value", "short" : "Tumor cell content fraction (0.0 – 1.0)", "definition" : "Tumor cell content fraction (0.0 – 1.0)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tumorCellContent.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb", "path" : "dnpm-lm-ngs-report.results.tmb", "short" : "Tumor Mutational Burden", "definition" : "Tumor Mutational Burden", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.id", "path" : "dnpm-lm-ngs-report.results.tmb.id", "representation" : ["xmlAttr"], "short" : "TMB result ID", "definition" : "TMB result ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.extension", "path" : "dnpm-lm-ngs-report.results.tmb.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tmb.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient", "path" : "dnpm-lm-ngs-report.results.tmb.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient.id", "path" : "dnpm-lm-ngs-report.results.tmb.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient.extension", "path" : "dnpm-lm-ngs-report.results.tmb.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tmb.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient.type", "path" : "dnpm-lm-ngs-report.results.tmb.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen", "path" : "dnpm-lm-ngs-report.results.tmb.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.specimen", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen.id", "path" : "dnpm-lm-ngs-report.results.tmb.specimen.id", "representation" : ["xmlAttr"], "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen.extension", "path" : "dnpm-lm-ngs-report.results.tmb.specimen.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tmb.specimen.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen.type", "path" : "dnpm-lm-ngs-report.results.tmb.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.specimen.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value", "path" : "dnpm-lm-ngs-report.results.tmb.value", "short" : "TMB quantity", "definition" : "TMB quantity", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.id", "path" : "dnpm-lm-ngs-report.results.tmb.value.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.extension", "path" : "dnpm-lm-ngs-report.results.tmb.value.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tmb.value.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.value", "path" : "dnpm-lm-ngs-report.results.tmb.value.value", "short" : "Numeric TMB value", "definition" : "Numeric TMB value", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.value.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.unit", "path" : "dnpm-lm-ngs-report.results.tmb.value.unit", "short" : "Unit (e.g. Mutations per megabase)", "definition" : "Unit (e.g. Mutations per megabase)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.value.unit", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation", "short" : "TMB interpretation", "definition" : "TMB interpretation", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.interpretation", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.id", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.extension", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.modifierExtension", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.code", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.code", "short" : "Interpretation code (e.g. high)", "definition" : "Interpretation code (e.g. high)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.display", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.display", "short" : "Interpretation display", "definition" : "Interpretation display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.system", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.system", "short" : "Interpretation system URI", "definition" : "Interpretation system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness", "path" : "dnpm-lm-ngs-report.results.brcaness", "short" : "BRCAness score", "definition" : "BRCAness score", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.id", "path" : "dnpm-lm-ngs-report.results.brcaness.id", "representation" : ["xmlAttr"], "short" : "BRCAness result ID", "definition" : "BRCAness result ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.extension", "path" : "dnpm-lm-ngs-report.results.brcaness.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.modifierExtension", "path" : "dnpm-lm-ngs-report.results.brcaness.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient", "path" : "dnpm-lm-ngs-report.results.brcaness.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient.id", "path" : "dnpm-lm-ngs-report.results.brcaness.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient.extension", "path" : "dnpm-lm-ngs-report.results.brcaness.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.brcaness.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient.type", "path" : "dnpm-lm-ngs-report.results.brcaness.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.specimen", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen.id", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.id", "representation" : ["xmlAttr"], "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen.extension", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen.modifierExtension", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen.type", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.value", "path" : "dnpm-lm-ngs-report.results.brcaness.value", "short" : "BRCAness score (0.0 – 1.0)", "definition" : "BRCAness score (0.0 – 1.0)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange", "short" : "Confidence range", "definition" : "Confidence range", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.id", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.extension", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.modifierExtension", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min", "short" : "Minimum confidence value", "definition" : "Minimum confidence value", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.max", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.max", "short" : "Maximum confidence value", "definition" : "Maximum confidence value", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.max", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore", "path" : "dnpm-lm-ngs-report.results.hrdScore", "short" : "Homologous Recombination Deficiency Score", "definition" : "Homologous Recombination Deficiency Score", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.id", "representation" : ["xmlAttr"], "short" : "HRD result ID", "definition" : "HRD result ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.extension", "path" : "dnpm-lm-ngs-report.results.hrdScore.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.modifierExtension", "path" : "dnpm-lm-ngs-report.results.hrdScore.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient.extension", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient.type", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.id", "representation" : ["xmlAttr"], "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen.extension", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen.modifierExtension", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen.type", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.value", "path" : "dnpm-lm-ngs-report.results.hrdScore.value", "short" : "HRD composite score", "definition" : "HRD composite score", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components", "path" : "dnpm-lm-ngs-report.results.hrdScore.components", "short" : "HRD component scores", "definition" : "HRD component scores", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.components", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.extension", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.modifierExtension", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.lst", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.lst", "short" : "Large-scale state transitions (LST)", "definition" : "Large-scale state transitions (LST)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.components.lst", "min" : 0, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.loh", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.loh", "short" : "Loss of heterozygosity (LOH)", "definition" : "Loss of heterozygosity (LOH)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.components.loh", "min" : 0, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.tai", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.tai", "short" : "Telomeric allelic imbalance (TAI)", "definition" : "Telomeric allelic imbalance (TAI)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.components.tai", "min" : 0, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation", "short" : "HRD interpretation", "definition" : "HRD interpretation", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.extension", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.modifierExtension", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.code", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.code", "short" : "Interpretation code (e.g. low)", "definition" : "Interpretation code (e.g. low)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.display", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.display", "short" : "Interpretation display", "definition" : "Interpretation display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.system", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.system", "short" : "Interpretation system URI", "definition" : "Interpretation system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants", "path" : "dnpm-lm-ngs-report.results.simpleVariants", "short" : "Simple variants (SNV / small indels)", "definition" : "Simple variants (SNV / small indels)", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.id", "representation" : ["xmlAttr"], "short" : "Variant ID", "definition" : "Variant ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient.type", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds", "short" : "External variant identifiers (e.g. dbSNP rs-number)", "definition" : "External variant identifiers (e.g. dbSNP rs-number)", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.value", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.value", "short" : "Identifier value", "definition" : "Identifier value", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.system", "short" : "Identifier system URI", "definition" : "Identifier system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.chromosome", "path" : "dnpm-lm-ngs-report.results.simpleVariants.chromosome", "short" : "Chromosome (e.g. chr4)", "definition" : "Chromosome (e.g. chr4)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.chromosome", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene", "short" : "Affected gene", "definition" : "Affected gene", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.code", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.display", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization", "short" : "Variant localisation in gene", "definition" : "Variant localisation in gene", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.code", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.display", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId", "short" : "Transcript identifier", "definition" : "Transcript identifier", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value", "short" : "Transcript ID value (e.g. ENST...)", "definition" : "Transcript ID value (e.g. ENST...)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system", "short" : "Transcript system URI", "definition" : "Transcript system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.exonId", "path" : "dnpm-lm-ngs-report.results.simpleVariants.exonId", "short" : "Exon identifier", "definition" : "Exon identifier", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.exonId", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position", "short" : "Genomic position (1-based)", "definition" : "Genomic position (1-based)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.position", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.extension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.start", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.start", "short" : "Start position", "definition" : "Start position", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.start", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.end", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.end", "short" : "End position", "definition" : "End position", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.end", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.altAllele", "path" : "dnpm-lm-ngs-report.results.simpleVariants.altAllele", "short" : "Alternate allele", "definition" : "Alternate allele", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.altAllele", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.refAllele", "path" : "dnpm-lm-ngs-report.results.simpleVariants.refAllele", "short" : "Reference allele", "definition" : "Reference allele", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.refAllele", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.dnaChange", "path" : "dnpm-lm-ngs-report.results.simpleVariants.dnaChange", "short" : "cDNA / DNA change in HGVS notation (e.g. c.570G>T)", "definition" : "cDNA / DNA change in HGVS notation (e.g. c.570G>T)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.dnaChange", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.proteinChange", "path" : "dnpm-lm-ngs-report.results.simpleVariants.proteinChange", "short" : "Protein change in HGVS notation (e.g. p.(Glu125Asp))", "definition" : "Protein change in HGVS notation (e.g. p.(Glu125Asp))", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.proteinChange", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.readDepth", "path" : "dnpm-lm-ngs-report.results.simpleVariants.readDepth", "short" : "Read depth at variant position", "definition" : "Read depth at variant position", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.readDepth", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.allelicFrequency", "path" : "dnpm-lm-ngs-report.results.simpleVariants.allelicFrequency", "short" : "Variant allelic frequency", "definition" : "Variant allelic frequency", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.allelicFrequency", "min" : 0, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation", "short" : "ClinVar / clinical interpretation", "definition" : "ClinVar / clinical interpretation", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). 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To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.modifierExtension", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. 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To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. 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To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange", "short" : "Start position range", "definition" : "Start position range", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.extension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.start", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.start", "short" : "Range start", "definition" : "Range start", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.start", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.end", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.end", "short" : "Range end", "definition" : "Range end", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.end", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange", "short" : "End position range", "definition" : "End position range", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). 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To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start", "short" : "Range start", "definition" : "Range start", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end", "short" : "Range end", "definition" : "Range end", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber", "short" : "Total copy number", "definition" : "Total copy number", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber", "short" : "Relative copy number", "definition" : "Relative copy number", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber", "min" : 0, "max" : "1" }, "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnA", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnA", "short" : "Copy number allele A", "definition" : "Copy number allele A", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnA", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnB", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnB", "short" : "Copy number allele B", "definition" : "Copy number allele B", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnB", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes", "short" : "Reported affected genes", "definition" : "Reported affected genes", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.extension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality", "short" : "CNV focality", "definition" : "CNV focality", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.extension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.code", "short" : "Focality code (e.g. focal)", "definition" : "Focality code (e.g. focal)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.display", "short" : "Focality display", "definition" : "Focality display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.system", "short" : "Focality system URI", "definition" : "Focality system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type", "short" : "CNV type (gain / loss)", "definition" : "CNV type (gain / loss)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.extension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.modifierExtension", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.code", "short" : "CNV type code", "definition" : "CNV type code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.display", "short" : "CNV type display", "definition" : "CNV type display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.system", "short" : "CNV type system URI", "definition" : "CNV type system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions", "path" : "dnpm-lm-ngs-report.results.dnaFusions", "short" : "DNA-level gene fusions", "definition" : "DNA-level gene fusions", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.id", "representation" : ["xmlAttr"], "short" : "DNA fusion ID", "definition" : "DNA fusion ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.extension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient.extension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient.type", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization", "short" : "Fusion localisation", "definition" : "Fusion localisation", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). 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To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.code", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.display", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.system", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime", "short" : "5-prime fusion partner", "definition" : "5-prime fusion partner", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). 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To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. 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This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.extension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.code", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.display", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.system", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.position", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.position", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime", "short" : "3-prime fusion partner", "definition" : "3-prime fusion partner", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.extension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene", "short" : "3-prime partner gene", "definition" : "3-prime partner gene", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.extension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.modifierExtension", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.code", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.display", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.system", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.position", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.position", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.reportedNumReads", "path" : "dnpm-lm-ngs-report.results.dnaFusions.reportedNumReads", "short" : "Number of reads supporting fusion", "definition" : "Number of reads supporting fusion", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.dnaFusions.reportedNumReads", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions", "path" : "dnpm-lm-ngs-report.results.rnaFusions", "short" : "RNA-level gene fusions", "definition" : "RNA-level gene fusions", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.id", "representation" : ["xmlAttr"], "short" : "RNA fusion ID", "definition" : "RNA fusion ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.id", "representation" : ["xmlAttr"], "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient.type", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.type", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds", "short" : "External identifiers (e.g. COSMIC fusion ID)", "definition" : "External identifiers (e.g. COSMIC fusion ID)", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.value", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.value", "short" : "Identifier value", "definition" : "Identifier value", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.system", "short" : "Identifier system URI", "definition" : "Identifier system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization", "short" : "Fusion localisation", "definition" : "Fusion localisation", "min" : 0, "max" : "*", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization", "min" : 0, "max" : "*" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime", "short" : "5-prime fusion partner", "definition" : "5-prime fusion partner", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene", "short" : "5-prime partner gene", "definition" : "5-prime partner gene", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript", "short" : "5-prime transcript", "definition" : "5-prime transcript", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value", "short" : "Transcript ID (e.g. ENST...)", "definition" : "Transcript ID (e.g. ENST...)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system", "short" : "Transcript system URI", "definition" : "Transcript system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon", "short" : "Exon identifier", "definition" : "Exon identifier", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand", "short" : "Strand (+ or -)", "definition" : "Strand (+ or -)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime", "short" : "3-prime fusion partner", "definition" : "3-prime fusion partner", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene", "short" : "3-prime partner gene", "definition" : "3-prime partner gene", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene", "min" : 1, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript", "short" : "3-prime transcript", "definition" : "3-prime transcript", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value", "short" : "Transcript ID (e.g. ENST...)", "definition" : "Transcript ID (e.g. ENST...)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system", "short" : "Transcript system URI", "definition" : "Transcript system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon", "short" : "Exon identifier", "definition" : "Exon identifier", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position", "min" : 1, "max" : "1" }, "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand", "short" : "Strand (+ or -)", "definition" : "Strand (+ or -)", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect", "short" : "RNA fusion effect", "definition" : "RNA fusion effect", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect", "min" : 0, "max" : "1" }, "type" : [{ "code" : "BackboneElement" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.id", "representation" : ["xmlAttr"], "short" : "Unique id for inter-element referencing", "definition" : "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.", "min" : 0, "max" : "1", "base" : { "path" : "Element.id", "min" : 0, "max" : "1" }, "type" : [{ "extension" : [{ "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type", "valueUrl" : "string" }], "code" : "http://hl7.org/fhirpath/System.String" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.extension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.extension", "slicing" : { "discriminator" : [{ "type" : "value", "path" : "url" }], "description" : "Extensions are always sliced by (at least) url", "rules" : "open" }, "short" : "Additional content defined by implementations", "definition" : "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "alias" : ["extensions", "user content"], "min" : 0, "max" : "*", "base" : { "path" : "Element.extension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : false, "isSummary" : false, "mapping" : [{ "identity" : "rim", "map" : "n/a" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.modifierExtension", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.modifierExtension", "short" : "Extensions that cannot be ignored even if unrecognized", "definition" : "May be used to represent additional information that is not part of the basic definition of the element and that modifies the understanding of the element in which it is contained and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.\n\nModifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).", "comment" : "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.", "requirements" : "Modifier extensions allow for extensions that *cannot* be safely ignored to be clearly distinguished from the vast majority of extensions which can be safely ignored. This promotes interoperability by eliminating the need for implementers to prohibit the presence of extensions. For further information, see the [definition of modifier extensions](http://hl7.org/fhir/R4/extensibility.html#modifierExtension).", "alias" : ["extensions", "user content", "modifiers"], "min" : 0, "max" : "*", "base" : { "path" : "BackboneElement.modifierExtension", "min" : 0, "max" : "*" }, "type" : [{ "code" : "Extension" }], "constraint" : [{ "key" : "ele-1", "severity" : "error", "human" : "All FHIR elements must have a @value or children", "expression" : "hasValue() or (children().count() > id.count())", "xpath" : "@value|f:*|h:div", "source" : "http://hl7.org/fhir/StructureDefinition/Element" }, { "key" : "ext-1", "severity" : "error", "human" : "Must have either extensions or value[x], not both", "expression" : "extension.exists() != value.exists()", "xpath" : "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])", "source" : "http://hl7.org/fhir/StructureDefinition/Extension" }], "isModifier" : true, "isModifierReason" : "Modifier extensions are expected to modify the meaning or interpretation of the element that contains them", "isSummary" : true, "mapping" : [{ "identity" : "rim", "map" : "N/A" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.code", "short" : "Effect code (e.g. in-frame)", "definition" : "Effect code (e.g. in-frame)", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.code", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.display", "short" : "Effect display", "definition" : "Effect display", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.display", "min" : 0, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.system", "short" : "Effect system URI", "definition" : "Effect system URI", "min" : 1, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.system", "min" : 1, "max" : "1" }, "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads", "path" : "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads", "short" : "Number of reads supporting fusion", "definition" : "Number of reads supporting fusion", "min" : 0, "max" : "1", "base" : { "path" : "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads", "min" : 0, "max" : "1" }, "type" : [{ "code" : "integer" }] }] }, "differential" : { "element" : [{ "id" : "dnpm-lm-ngs-report", "path" : "dnpm-lm-ngs-report", "short" : "DNPM NGS Report", "definition" : "Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array" }, { "id" : "dnpm-lm-ngs-report.dnpmId", "path" : "dnpm-lm-ngs-report.dnpmId", "short" : "NGS Report UUID (DNPM internal ID)", "definition" : "NGS Report UUID (DNPM internal ID)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.patient", "path" : "dnpm-lm-ngs-report.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.patient.id", "path" : "dnpm-lm-ngs-report.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.patient.type", "path" : "dnpm-lm-ngs-report.patient.type", "short" : "Reference type (Patient)", "definition" : "Reference type (Patient)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.specimen", "path" : "dnpm-lm-ngs-report.specimen", "short" : "Tumor specimen reference", "definition" : "Tumor specimen reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.specimen.id", "path" : "dnpm-lm-ngs-report.specimen.id", "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.specimen.type", "path" : "dnpm-lm-ngs-report.specimen.type", "short" : "Reference type (TumorSpecimen)", "definition" : "Reference type (TumorSpecimen)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.issuedOn", "path" : "dnpm-lm-ngs-report.issuedOn", "short" : "Report issue date (YYYY-MM-DD)", "definition" : "Report issue date (YYYY-MM-DD)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.type", "path" : "dnpm-lm-ngs-report.type", "short" : "NGS analysis type (e.g. exome, panel)", "definition" : "NGS analysis type (e.g. exome, panel)", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.type.code", "path" : "dnpm-lm-ngs-report.type.code", "short" : "Type code", "definition" : "Type code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.type.display", "path" : "dnpm-lm-ngs-report.type.display", "short" : "Type display", "definition" : "Type display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.type.system", "path" : "dnpm-lm-ngs-report.type.system", "short" : "Type system URI", "definition" : "Type system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata", "path" : "dnpm-lm-ngs-report.metadata", "short" : "NGS run metadata", "definition" : "NGS run metadata", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome", "short" : "Reference genome used", "definition" : "Reference genome used", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.code", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.code", "short" : "Genome build code (e.g. GRCh38)", "definition" : "Genome build code (e.g. GRCh38)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.display", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.display", "short" : "Genome build display", "definition" : "Genome build display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.referenceGenome.system", "path" : "dnpm-lm-ngs-report.metadata.referenceGenome.system", "short" : "Genome build system URI", "definition" : "Genome build system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer", "path" : "dnpm-lm-ngs-report.metadata.sequencer", "short" : "Sequencer instrument", "definition" : "Sequencer instrument", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.code", "path" : "dnpm-lm-ngs-report.metadata.sequencer.code", "short" : "Sequencer code", "definition" : "Sequencer code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.display", "path" : "dnpm-lm-ngs-report.metadata.sequencer.display", "short" : "Sequencer display", "definition" : "Sequencer display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.sequencer.system", "path" : "dnpm-lm-ngs-report.metadata.sequencer.system", "short" : "Sequencer system URI", "definition" : "Sequencer system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.kitManufacturer", "path" : "dnpm-lm-ngs-report.metadata.kitManufacturer", "short" : "Kit manufacturer name", "definition" : "Kit manufacturer name", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.kitType", "path" : "dnpm-lm-ngs-report.metadata.kitType", "short" : "Kit type name", "definition" : "Kit type name", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.pipeline", "path" : "dnpm-lm-ngs-report.metadata.pipeline", "short" : "Bioinformatics pipeline identifier", "definition" : "Bioinformatics pipeline identifier", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent", "short" : "Tumor cell content metadata estimate", "definition" : "Tumor cell content metadata estimate", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method", "short" : "Estimation method", "definition" : "Estimation method", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code", "short" : "Method code", "definition" : "Method code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display", "short" : "Method display", "definition" : "Method display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system", "short" : "Method system URI", "definition" : "Method system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.metadata.tumorCellContent.value", "path" : "dnpm-lm-ngs-report.metadata.tumorCellContent.value", "short" : "Tumor cell content fraction (0.0 – 1.0)", "definition" : "Tumor cell content fraction (0.0 – 1.0)", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results", "path" : "dnpm-lm-ngs-report.results", "short" : "NGS analysis results", "definition" : "NGS analysis results", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent", "path" : "dnpm-lm-ngs-report.results.tumorCellContent", "short" : "Bioinformatically determined tumor cell content", "definition" : "Bioinformatically determined tumor cell content", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.id", "short" : "Result ID", "definition" : "Result ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.type", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.id", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.id", "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method", "short" : "Determination method", "definition" : "Determination method", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.code", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.code", "short" : "Method code", "definition" : "Method code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.display", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.display", "short" : "Method display", "definition" : "Method display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.method.system", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.method.system", "short" : "Method system URI", "definition" : "Method system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tumorCellContent.value", "path" : "dnpm-lm-ngs-report.results.tumorCellContent.value", "short" : "Tumor cell content fraction (0.0 – 1.0)", "definition" : "Tumor cell content fraction (0.0 – 1.0)", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb", "path" : "dnpm-lm-ngs-report.results.tmb", "short" : "Tumor Mutational Burden", "definition" : "Tumor Mutational Burden", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.id", "path" : "dnpm-lm-ngs-report.results.tmb.id", "short" : "TMB result ID", "definition" : "TMB result ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient", "path" : "dnpm-lm-ngs-report.results.tmb.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient.id", "path" : "dnpm-lm-ngs-report.results.tmb.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.patient.type", "path" : "dnpm-lm-ngs-report.results.tmb.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen", "path" : "dnpm-lm-ngs-report.results.tmb.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen.id", "path" : "dnpm-lm-ngs-report.results.tmb.specimen.id", "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.specimen.type", "path" : "dnpm-lm-ngs-report.results.tmb.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value", "path" : "dnpm-lm-ngs-report.results.tmb.value", "short" : "TMB quantity", "definition" : "TMB quantity", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.value", "path" : "dnpm-lm-ngs-report.results.tmb.value.value", "short" : "Numeric TMB value", "definition" : "Numeric TMB value", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.value.unit", "path" : "dnpm-lm-ngs-report.results.tmb.value.unit", "short" : "Unit (e.g. Mutations per megabase)", "definition" : "Unit (e.g. Mutations per megabase)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation", "short" : "TMB interpretation", "definition" : "TMB interpretation", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.code", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.code", "short" : "Interpretation code (e.g. high)", "definition" : "Interpretation code (e.g. high)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.display", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.display", "short" : "Interpretation display", "definition" : "Interpretation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.tmb.interpretation.system", "path" : "dnpm-lm-ngs-report.results.tmb.interpretation.system", "short" : "Interpretation system URI", "definition" : "Interpretation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness", "path" : "dnpm-lm-ngs-report.results.brcaness", "short" : "BRCAness score", "definition" : "BRCAness score", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.id", "path" : "dnpm-lm-ngs-report.results.brcaness.id", "short" : "BRCAness result ID", "definition" : "BRCAness result ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient", "path" : "dnpm-lm-ngs-report.results.brcaness.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient.id", "path" : "dnpm-lm-ngs-report.results.brcaness.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.patient.type", "path" : "dnpm-lm-ngs-report.results.brcaness.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen.id", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.id", "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.specimen.type", "path" : "dnpm-lm-ngs-report.results.brcaness.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.value", "path" : "dnpm-lm-ngs-report.results.brcaness.value", "short" : "BRCAness score (0.0 – 1.0)", "definition" : "BRCAness score (0.0 – 1.0)", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange", "short" : "Confidence range", "definition" : "Confidence range", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min", "short" : "Minimum confidence value", "definition" : "Minimum confidence value", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.max", "path" : "dnpm-lm-ngs-report.results.brcaness.confidenceRange.max", "short" : "Maximum confidence value", "definition" : "Maximum confidence value", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore", "path" : "dnpm-lm-ngs-report.results.hrdScore", "short" : "Homologous Recombination Deficiency Score", "definition" : "Homologous Recombination Deficiency Score", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.id", "short" : "HRD result ID", "definition" : "HRD result ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.patient.type", "path" : "dnpm-lm-ngs-report.results.hrdScore.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen", "short" : "Specimen reference", "definition" : "Specimen reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen.id", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.id", "short" : "Specimen ID", "definition" : "Specimen ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.specimen.type", "path" : "dnpm-lm-ngs-report.results.hrdScore.specimen.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.value", "path" : "dnpm-lm-ngs-report.results.hrdScore.value", "short" : "HRD composite score", "definition" : "HRD composite score", "min" : 1, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components", "path" : "dnpm-lm-ngs-report.results.hrdScore.components", "short" : "HRD component scores", "definition" : "HRD component scores", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.lst", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.lst", "short" : "Large-scale state transitions (LST)", "definition" : "Large-scale state transitions (LST)", "min" : 0, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.loh", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.loh", "short" : "Loss of heterozygosity (LOH)", "definition" : "Loss of heterozygosity (LOH)", "min" : 0, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.components.tai", "path" : "dnpm-lm-ngs-report.results.hrdScore.components.tai", "short" : "Telomeric allelic imbalance (TAI)", "definition" : "Telomeric allelic imbalance (TAI)", "min" : 0, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation", "short" : "HRD interpretation", "definition" : "HRD interpretation", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.code", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.code", "short" : "Interpretation code (e.g. low)", "definition" : "Interpretation code (e.g. low)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.display", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.display", "short" : "Interpretation display", "definition" : "Interpretation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.system", "path" : "dnpm-lm-ngs-report.results.hrdScore.interpretation.system", "short" : "Interpretation system URI", "definition" : "Interpretation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants", "path" : "dnpm-lm-ngs-report.results.simpleVariants", "short" : "Simple variants (SNV / small indels)", "definition" : "Simple variants (SNV / small indels)", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.id", "short" : "Variant ID", "definition" : "Variant ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient.id", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.patient.type", "path" : "dnpm-lm-ngs-report.results.simpleVariants.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds", "short" : "External variant identifiers (e.g. dbSNP rs-number)", "definition" : "External variant identifiers (e.g. dbSNP rs-number)", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.value", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.value", "short" : "Identifier value", "definition" : "Identifier value", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.externalIds.system", "short" : "Identifier system URI", "definition" : "Identifier system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.chromosome", "path" : "dnpm-lm-ngs-report.results.simpleVariants.chromosome", "short" : "Chromosome (e.g. chr4)", "definition" : "Chromosome (e.g. chr4)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene", "short" : "Affected gene", "definition" : "Affected gene", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.code", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.display", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.gene.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization", "short" : "Variant localisation in gene", "definition" : "Variant localisation in gene", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.code", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.display", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.localization.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId", "short" : "Transcript identifier", "definition" : "Transcript identifier", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value", "short" : "Transcript ID value (e.g. ENST...)", "definition" : "Transcript ID value (e.g. ENST...)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system", "short" : "Transcript system URI", "definition" : "Transcript system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.exonId", "path" : "dnpm-lm-ngs-report.results.simpleVariants.exonId", "short" : "Exon identifier", "definition" : "Exon identifier", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position", "short" : "Genomic position (1-based)", "definition" : "Genomic position (1-based)", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.start", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.start", "short" : "Start position", "definition" : "Start position", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.position.end", "path" : "dnpm-lm-ngs-report.results.simpleVariants.position.end", "short" : "End position", "definition" : "End position", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.altAllele", "path" : "dnpm-lm-ngs-report.results.simpleVariants.altAllele", "short" : "Alternate allele", "definition" : "Alternate allele", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.refAllele", "path" : "dnpm-lm-ngs-report.results.simpleVariants.refAllele", "short" : "Reference allele", "definition" : "Reference allele", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.dnaChange", "path" : "dnpm-lm-ngs-report.results.simpleVariants.dnaChange", "short" : "cDNA / DNA change in HGVS notation (e.g. c.570G>T)", "definition" : "cDNA / DNA change in HGVS notation (e.g. c.570G>T)", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.proteinChange", "path" : "dnpm-lm-ngs-report.results.simpleVariants.proteinChange", "short" : "Protein change in HGVS notation (e.g. p.(Glu125Asp))", "definition" : "Protein change in HGVS notation (e.g. p.(Glu125Asp))", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.readDepth", "path" : "dnpm-lm-ngs-report.results.simpleVariants.readDepth", "short" : "Read depth at variant position", "definition" : "Read depth at variant position", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.allelicFrequency", "path" : "dnpm-lm-ngs-report.results.simpleVariants.allelicFrequency", "short" : "Variant allelic frequency", "definition" : "Variant allelic frequency", "min" : 0, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation", "short" : "ClinVar / clinical interpretation", "definition" : "ClinVar / clinical interpretation", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.code", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.code", "short" : "Interpretation code", "definition" : "Interpretation code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.display", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.display", "short" : "Interpretation display", "definition" : "Interpretation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.system", "path" : "dnpm-lm-ngs-report.results.simpleVariants.interpretation.system", "short" : "Interpretation system URI", "definition" : "Interpretation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants", "short" : "Copy number variants (CNV)", "definition" : "Copy number variants (CNV)", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.id", "short" : "CNV ID", "definition" : "CNV ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.patient", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.patient.id", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.patient.type", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.chromosome", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.chromosome", "short" : "Chromosome (e.g. chr7)", "definition" : "Chromosome (e.g. chr7)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization", "short" : "CNV localisation", "definition" : "CNV localisation", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange", "short" : "Start position range", "definition" : "Start position range", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.start", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.start", "short" : "Range start", "definition" : "Range start", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.end", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.startRange.end", "short" : "Range end", "definition" : "Range end", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange", "short" : "End position range", "definition" : "End position range", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start", "short" : "Range start", "definition" : "Range start", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end", "short" : "Range end", "definition" : "Range end", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber", "short" : "Total copy number", "definition" : "Total copy number", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber", "short" : "Relative copy number", "definition" : "Relative copy number", "min" : 0, "max" : "1", "type" : [{ "code" : "decimal" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnA", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnA", "short" : "Copy number allele A", "definition" : "Copy number allele A", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnB", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.cnB", "short" : "Copy number allele B", "definition" : "Copy number allele B", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes", "short" : "Reported affected genes", "definition" : "Reported affected genes", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.reportedAffectedGenes.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality", "short" : "CNV focality", "definition" : "CNV focality", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.code", "short" : "Focality code (e.g. focal)", "definition" : "Focality code (e.g. focal)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.display", "short" : "Focality display", "definition" : "Focality display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.focality.system", "short" : "Focality system URI", "definition" : "Focality system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type", "short" : "CNV type (gain / loss)", "definition" : "CNV type (gain / loss)", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.code", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.code", "short" : "CNV type code", "definition" : "CNV type code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.display", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.display", "short" : "CNV type display", "definition" : "CNV type display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.system", "path" : "dnpm-lm-ngs-report.results.copyNumberVariants.type.system", "short" : "CNV type system URI", "definition" : "CNV type system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions", "path" : "dnpm-lm-ngs-report.results.dnaFusions", "short" : "DNA-level gene fusions", "definition" : "DNA-level gene fusions", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.id", "short" : "DNA fusion ID", "definition" : "DNA fusion ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient.id", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.patient.type", "path" : "dnpm-lm-ngs-report.results.dnaFusions.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization", "short" : "Fusion localisation", "definition" : "Fusion localisation", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.code", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.display", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.localization.system", "path" : "dnpm-lm-ngs-report.results.dnaFusions.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime", "short" : "5-prime fusion partner", "definition" : "5-prime fusion partner", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene", "short" : "5-prime partner gene", "definition" : "5-prime partner gene", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.code", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.display", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.system", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.position", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner5prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime", "short" : "3-prime fusion partner", "definition" : "3-prime fusion partner", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene", "short" : "3-prime partner gene", "definition" : "3-prime partner gene", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.code", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.display", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.system", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.position", "path" : "dnpm-lm-ngs-report.results.dnaFusions.fusionPartner3prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.dnaFusions.reportedNumReads", "path" : "dnpm-lm-ngs-report.results.dnaFusions.reportedNumReads", "short" : "Number of reads supporting fusion", "definition" : "Number of reads supporting fusion", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions", "path" : "dnpm-lm-ngs-report.results.rnaFusions", "short" : "RNA-level gene fusions", "definition" : "RNA-level gene fusions", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.id", "short" : "RNA fusion ID", "definition" : "RNA fusion ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient", "short" : "Patient reference", "definition" : "Patient reference", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient.id", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.id", "short" : "Patient ID", "definition" : "Patient ID", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.patient.type", "path" : "dnpm-lm-ngs-report.results.rnaFusions.patient.type", "short" : "Reference type", "definition" : "Reference type", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds", "short" : "External identifiers (e.g. COSMIC fusion ID)", "definition" : "External identifiers (e.g. COSMIC fusion ID)", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.value", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.value", "short" : "Identifier value", "definition" : "Identifier value", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.externalIds.system", "short" : "Identifier system URI", "definition" : "Identifier system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization", "short" : "Fusion localisation", "definition" : "Fusion localisation", "min" : 0, "max" : "*", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.code", "short" : "Localisation code", "definition" : "Localisation code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.display", "short" : "Localisation display", "definition" : "Localisation display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.localization.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.localization.system", "short" : "Localisation system URI", "definition" : "Localisation system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime", "short" : "5-prime fusion partner", "definition" : "5-prime fusion partner", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene", "short" : "5-prime partner gene", "definition" : "5-prime partner gene", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript", "short" : "5-prime transcript", "definition" : "5-prime transcript", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value", "short" : "Transcript ID (e.g. ENST...)", "definition" : "Transcript ID (e.g. ENST...)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system", "short" : "Transcript system URI", "definition" : "Transcript system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon", "short" : "Exon identifier", "definition" : "Exon identifier", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand", "short" : "Strand (+ or -)", "definition" : "Strand (+ or -)", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime", "short" : "3-prime fusion partner", "definition" : "3-prime fusion partner", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene", "short" : "3-prime partner gene", "definition" : "3-prime partner gene", "min" : 1, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code", "short" : "HGNC gene code", "definition" : "HGNC gene code", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display", "short" : "Gene symbol", "definition" : "Gene symbol", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system", "short" : "Gene nomenclature system URI", "definition" : "Gene nomenclature system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript", "short" : "3-prime transcript", "definition" : "3-prime transcript", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value", "short" : "Transcript ID (e.g. ENST...)", "definition" : "Transcript ID (e.g. ENST...)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system", "short" : "Transcript system URI", "definition" : "Transcript system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon", "short" : "Exon identifier", "definition" : "Exon identifier", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position", "short" : "Breakpoint position", "definition" : "Breakpoint position", "min" : 1, "max" : "1", "type" : [{ "code" : "integer" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand", "path" : "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand", "short" : "Strand (+ or -)", "definition" : "Strand (+ or -)", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect", "short" : "RNA fusion effect", "definition" : "RNA fusion effect", "min" : 0, "max" : "1", "type" : [{ "code" : "BackboneElement" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.code", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.code", "short" : "Effect code (e.g. in-frame)", "definition" : "Effect code (e.g. in-frame)", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.display", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.display", "short" : "Effect display", "definition" : "Effect display", "min" : 0, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.effect.system", "path" : "dnpm-lm-ngs-report.results.rnaFusions.effect.system", "short" : "Effect system URI", "definition" : "Effect system URI", "min" : 1, "max" : "1", "type" : [{ "code" : "string" }] }, { "id" : "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads", "path" : "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads", "short" : "Number of reads supporting fusion", "definition" : "Number of reads supporting fusion", "min" : 0, "max" : "1", "type" : [{ "code" : "integer" }] }] } }