MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
This page is part of the MII IG Kerndatensatz-Modul Biobank (v2027.0.0-ballot: 2027 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. No current official version has been published yet. For a full list of available versions, see the Directory of published versions
<Specimen xmlns="http://hl7.org/fhir">
<id value="OrganoidLunge"/>
<meta>
<profile
value="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-pr-biobank-zellinie-organoid"/>
</meta>
<language value="en"/>
<text>
<status value="extensions"/>
<div xml:lang="en" lang="en"><hr/><p><b>English</b></p><hr/><p class="res-header-id"><b>Generated Narrative: Specimen OrganoidLunge</b></p><a name="OrganoidLunge"> </a><a name="hcOrganoidLunge"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px"/><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-mii-pr-biobank-zellinie-organoid.html">MII PR Biobank Specimen Zellinie Organoid</a></p></div><p><b>MII EX Biobank Kulturprotokoll</b>: <a href="DocumentReference-Kulturprotokoll.html">DocumentReference: status = current; date = 2018-06-20 09:00:00+0100; description = Standardprotokoll zur Kultivierung von Lungentumor-Organoiden</a></p><blockquote><p><b>MII EX Biobank Zelllinien-Modifikation</b></p><ul><li>artDerModifikation: <span title="Codes:{http://purl.obolibrary.org/obo/clo.owl CLO:0037375}">derives from cell with knockout gene</span></li><li>zielGen: <a href="http://terminology.hl7.org/6.3.0/CodeSystem-v3-hgnc.html#v3-hgnc-TP53">HUGO Gene Nomenclature Committee Genes: TP53</a> (tumor protein p53)</li><li>protokoll: <a href="DocumentReference-ProtocolCRISPRTP53.html">DocumentReference: status = current; date = 2018-06-19 09:00:00+0100; description = CRISPR Knockout-Protokoll für TP53 in Lungentumor-Organoiden</a></li></ul></blockquote><p><b>MII EX Biobank Anzahl Passagen</b>: 3</p><p><b>identifier</b>: <code>https://biobank.uk-musterstadt.de/fhir/sid/proben</code>/6789-ORG-1</p><p><b>status</b>: Available</p><p><b>type</b>: <span title="Codes:{http://snomed.info/sct 123038009}, {https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs Organoid}">Specimen (specimen)</span></p><p><b>subject</b>: <a href="https://simplifier.net/resolve?scope=de.basisprofil.r4@1.6.0&canonical=http://fhir.org/packages/de.basisprofil.r4/Patient/mii-exa-test-data-patient-1">Patient/mii-exa-test-data-patient-1</a></p><p><b>parent</b>: </p><p><b style="color: maroon">Exception Generating Narrative: Cannot invoke "org.hl7.fhir.r5.renderers.utils.ResourceWrapper.fhirType()" because "resource" is null </b></p></div>
</text>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-kulturprotokoll">
<valueReference>🔗
<reference value="DocumentReference/Kulturprotokoll"/>
</valueReference>
</extension>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-modifikationen">
<extension url="artDerModifikation">
<valueCodeableConcept>
<coding>
<system value="http://purl.obolibrary.org/obo/clo.owl"/>
<code value="CLO:0037375"/>
<display value="derives from cell with knockout gene"/>
</coding>
</valueCodeableConcept>
</extension>
<extension url="zielGen">
<valueCoding>
<system value="http://www.genenames.org"/>
<code value="TP53"/>
<display value="tumor protein p53"/>
</valueCoding>
</extension>
<extension url="protokoll">
<valueReference>🔗
<reference value="DocumentReference/ProtocolCRISPRTP53"/>
</valueReference>
</extension>
</extension>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-anzahl-passagen">
<valueInteger value="3"/>
</extension>
<identifier>
<system value="https://biobank.uk-musterstadt.de/fhir/sid/proben"/>
<value value="6789-ORG-1"/>
</identifier>
<status value="available"/>
<type>
<coding>
<system value="http://snomed.info/sct"/>
<code value="123038009"/>
<display value="Specimen (specimen)"/>
</coding>
<coding>
<system
value="https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs"/>
<code value="Organoid"/>
<display value="Organoids"/>
</coding>
</type>
<subject>
<reference value="Patient/mii-exa-test-data-patient-1"/>
</subject>
<parent>🔗
<reference value="Specimen/MusterprobeGewebe"/>
</parent>
<collection>
<collectedDateTime value="2018-06-08T15:34:00+01:00"/>
</collection>
<processing>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen">
<valueRange>
<low>
<value value="37"/>
<unit value="°C"/>
<system value="http://unitsofmeasure.org"/>
<code value="Cel"/>
</low>
<high>
<value value="37"/>
<unit value="°C"/>
<system value="http://unitsofmeasure.org"/>
<code value="Cel"/>
</high>
</valueRange>
</extension>
<procedure>
<coding>
<system value="http://snomed.info/sct"/>
<code value="1186936003"/>
<display value="Storage of specimen (procedure)"/>
</coding>
</procedure>
<timePeriod>
<start value="2018-06-20T10:00:00+01:00"/>
<end value="2018-06-27T10:00:00+01:00"/>
</timePeriod>
</processing>
<container>
<type>
<coding>
<system value="http://snomed.info/sct"/>
<code value="83059008"/>
<display value="Tube, device (physical object)"/>
</coding>
</type>
<specimenQuantity>
<value value="1"/>
<unit value="ml"/>
<system value="http://unitsofmeasure.org"/>
<code value="ml"/>
</specimenQuantity>
</container>
</Specimen>