MII Implementation Guide Microbiology
2027.0.0-ballot2 -
Germany
MII Implementation Guide Microbiology
2027.0.0-ballot2 -
Germany
MII Implementation Guide Microbiology - Local Development build (v2027.0.0-ballot2) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
| Active as of 2026-09-14 |
{
"resourceType" : "ValueSet",
"id" : "mii-vs-mikrobio-virulenz-loinc",
"language" : "en",
"text" : {
"status" : "generated",
"div" : "<div xml:lang=\"en\" lang=\"en\"><hr/><p><b>English</b></p><hr/><p class=\"res-header-id\"><b>Generated Narrative: ValueSet mii-vs-mikrobio-virulenz-loinc</b></p><a name=\"mii-vs-mikrobio-virulenz-loinc\"> </a><a name=\"hcmii-vs-mikrobio-virulenz-loinc\"> </a><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><span title=\"Version is explicitly stated to be 2.82\"> version 📍2.82</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/87402-4/\">87402-4</a></td><td>Escherichia coli aidA-I gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87318-2/\">87318-2</a></td><td>Escherichia coli eaeA gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87319-0/\">87319-0</a></td><td>Escherichia coli enteroaggregative astA gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87320-8/\">87320-8</a></td><td>Escherichia coli enterotoxigenic heat-labile toxin DNA [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87321-6/\">87321-6</a></td><td>Escherichia coli enterotoxigenic sta gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87322-4/\">87322-4</a></td><td>Escherichia coli enterotoxigenic stb gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87370-3/\">87370-3</a></td><td>Escherichia coli fasA gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87371-1/\">87371-1</a></td><td>Escherichia coli fedF gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87372-9/\">87372-9</a></td><td>Escherichia coli FimF41a gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87373-7/\">87373-7</a></td><td>Escherichia coli K88 DNA [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87374-5/\">87374-5</a></td><td>Escherichia coli K99 DNA [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87375-2/\">87375-2</a></td><td>Escherichia coli paa gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87376-0/\">87376-0</a></td><td>Escherichia coli Stx1 toxin stx1 gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87377-8/\">87377-8</a></td><td>Escherichia coli Stx2 toxin stx2 gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87380-2/\">87380-2</a></td><td>Escherichia coli Stx2e-Toxin stx2e-Gen [Nachweis] in Isolat mittels Nukleinsäureamplifikation mit Sondendetektion</td></tr><tr><td><a href=\"https://loinc.org/87304-2/\">87304-2</a></td><td>Clostridium perfringens cpa gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87397-6/\">87397-6</a></td><td>Clostridium perfringens cpb gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87305-9/\">87305-9</a></td><td>Clostridium perfringens cpb2 gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87306-7/\">87306-7</a></td><td>Clostridium perfringens cpe gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87307-5/\">87307-5</a></td><td>Clostridium perfringens etx gene [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/87313-3/\">87313-3</a></td><td>Clostridium perfringens iota toxin DNA [Presence] in Isolate by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/53941-1/\">53941-1</a></td><td>Vibrio cholerae toxin Ag [Presence] in Isolate</td></tr><tr><td><a href=\"https://loinc.org/24102-6/\">24102-6</a></td><td>Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)</td></tr><tr><td><a href=\"https://loinc.org/13329-8/\">13329-8</a></td><td>Escherichia coli labile toxin [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/33708-9/\">33708-9</a></td><td>Clostridium botulinum toxin [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/33712-1/\">33712-1</a></td><td>Clostridium botulinum toxin A+B+E [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/33696-6/\">33696-6</a></td><td>Clostridium botulinum toxin [Presence] in Specimen by Mouse bioassay</td></tr><tr><td><a href=\"https://loinc.org/33709-7/\">33709-7</a></td><td>Clostridium botulinum toxin A [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/33713-9/\">33713-9</a></td><td>Clostridium botulinum toxin B [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/33710-5/\">33710-5</a></td><td>Clostridium botulinum toxin E [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/23349-4/\">23349-4</a></td><td>Pasteurella multocida toxin [Presence] in Specimen by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/45039-5/\">45039-5</a></td><td>Clostridium botulinum toxin [Presence] in Specimen by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/33711-3/\">33711-3</a></td><td>Clostridium botulinum toxin F [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/33704-8/\">33704-8</a></td><td>Clostridium botulinum toxin A+B+E [Presence] in Specimen by Mouse bioassay neutralization</td></tr><tr><td><a href=\"https://loinc.org/33701-4/\">33701-4</a></td><td>Clostridium botulinum toxin A [Presence] in Specimen by Mouse bioassay neutralization</td></tr><tr><td><a href=\"https://loinc.org/33705-5/\">33705-5</a></td><td>Clostridium botulinum toxin B [Presence] in Specimen by Mouse bioassay neutralization</td></tr><tr><td><a href=\"https://loinc.org/33702-2/\">33702-2</a></td><td>Clostridium botulinum toxin E [Presence] in Specimen by Mouse bioassay neutralization</td></tr><tr><td><a href=\"https://loinc.org/38989-0/\">38989-0</a></td><td>Clostridium botulinum toxin A+B+E+F+G [Presence] in Specimen by Mouse bioassay neutralization</td></tr><tr><td><a href=\"https://loinc.org/63427-9/\">63427-9</a></td><td>Escherichia coli Stx1 toxin stx1 gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/63428-7/\">63428-7</a></td><td>Escherichia coli Stx2 toxin stx2 gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/71786-8/\">71786-8</a></td><td>Staphylococcus aureus exfoliative toxin A eta gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/71787-6/\">71787-6</a></td><td>Staphylococcus aureus exfoliative toxin B etb gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/41630-5/\">41630-5</a></td><td>Clostridium botulinum toxin A [Presence] in Specimen by Immunofluorescence</td></tr><tr><td><a href=\"https://loinc.org/41632-1/\">41632-1</a></td><td>Clostridium botulinum toxin B [Presence] in Specimen by Immunofluorescence</td></tr><tr><td><a href=\"https://loinc.org/41634-7/\">41634-7</a></td><td>Clostridium botulinum toxin E [Presence] in Specimen by Immunofluorescence</td></tr><tr><td><a href=\"https://loinc.org/41635-4/\">41635-4</a></td><td>Clostridium botulinum toxin F [Presence] in Specimen by Immunofluorescence</td></tr><tr><td><a href=\"https://loinc.org/33703-0/\">33703-0</a></td><td>Clostridium botulinum toxin F [Presence] in Specimen by Mouse bioassay neutralization</td></tr><tr><td><a href=\"https://loinc.org/23935-0/\">23935-0</a></td><td>Staphylococcus aureus toxic shock syndrome toxin 1 [Presence] in Specimen</td></tr><tr><td><a href=\"https://loinc.org/80518-4/\">80518-4</a></td><td>Clostridium baratii toxin F bont gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/81644-7/\">81644-7</a></td><td>Clostridium botulinum toxin C botC gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/81645-4/\">81645-4</a></td><td>Clostridium botulinum toxin D botD gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/81646-2/\">81646-2</a></td><td>Clostridium botulinum toxin E botE gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/81647-0/\">81647-0</a></td><td>Clostridium botulinum toxin F botF gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/53943-7/\">53943-7</a></td><td>Bacterial cytolethal distending toxin cdt gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94611-1/\">94611-1</a></td><td>Pasteurella multocida toxin toxA gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/41631-3/\">41631-3</a></td><td>Clostridium botulinum toxin A botA gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/41633-9/\">41633-9</a></td><td>Clostridium botulinum toxin B botB gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/81648-8/\">81648-8</a></td><td>Clostridium botulinum toxin G botG gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/44881-1/\">44881-1</a></td><td>Staphylococcus aureus toxic shock syndrome toxin gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/53942-9/\">53942-9</a></td><td>Vibrio cholerae toxin ctx gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/48816-3/\">48816-3</a></td><td>Staphylococcus aureus Panton-Valentine leukocidin gene [Presence] in Isolate or Specimen by Molecular genetics method</td></tr></table></li></ul></div>"
},
"url" : "https://www.medizininformatik-initiative.de/fhir/modul-mikrobio/ValueSet/mii-vs-mikrobio-virulenz-loinc",
"version" : "2027.0.0-ballot2",
"name" : "MII_VS_Mikrobio_Virulenz_LOINC",
"title" : "MII VS Mikrobio Virulenz [LOINC]",
"status" : "active",
"experimental" : false,
"date" : "2026-09-14T18:28:36+00:00",
"publisher" : "Medizininformatik Initiative",
"contact" : [
{
"name" : "Medizininformatik Initiative",
"telecom" : [
{
"system" : "url",
"value" : "https://www.medizininformatik-initiative.de"
}
]
}
],
"description" : "Tests-ValueSet für Virulenzfaktoren: LOINC-Codes für den Nachweis oder Ausschluss von Virulenzdeterminanten.",
"jurisdiction" : [
{
"coding" : [
{
"system" : "urn:iso:std:iso:3166",
"code" : "DE",
"display" : "Germany"
}
]
}
],
"compose" : {
"include" : [
{
"system" : "http://loinc.org",
"version" : "2.82",
"concept" : [
{
"code" : "87402-4",
"display" : "Escherichia coli aidA-I gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87318-2",
"display" : "Escherichia coli eaeA gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87319-0",
"display" : "Escherichia coli enteroaggregative astA gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87320-8",
"display" : "Escherichia coli enterotoxigenic heat-labile toxin DNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87321-6",
"display" : "Escherichia coli enterotoxigenic sta gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87322-4",
"display" : "Escherichia coli enterotoxigenic stb gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87370-3",
"display" : "Escherichia coli fasA gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87371-1",
"display" : "Escherichia coli fedF gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87372-9",
"display" : "Escherichia coli FimF41a gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87373-7",
"display" : "Escherichia coli K88 DNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87374-5",
"display" : "Escherichia coli K99 DNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87375-2",
"display" : "Escherichia coli paa gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87376-0",
"display" : "Escherichia coli Stx1 toxin stx1 gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87377-8",
"display" : "Escherichia coli Stx2 toxin stx2 gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87380-2",
"display" : "Escherichia coli Stx2e-Toxin stx2e-Gen [Nachweis] in Isolat mittels Nukleinsäureamplifikation mit Sondendetektion"
},
{
"code" : "87304-2",
"display" : "Clostridium perfringens cpa gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87397-6",
"display" : "Clostridium perfringens cpb gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87305-9",
"display" : "Clostridium perfringens cpb2 gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87306-7",
"display" : "Clostridium perfringens cpe gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87307-5",
"display" : "Clostridium perfringens etx gene [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "87313-3",
"display" : "Clostridium perfringens iota toxin DNA [Presence] in Isolate by NAA with probe detection"
},
{
"code" : "53941-1",
"display" : "Vibrio cholerae toxin Ag [Presence] in Isolate"
},
{
"code" : "24102-6",
"display" : "Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID)"
},
{
"code" : "13329-8",
"display" : "Escherichia coli labile toxin [Presence] in Specimen"
},
{
"code" : "33708-9",
"display" : "Clostridium botulinum toxin [Presence] in Specimen"
},
{
"code" : "33712-1",
"display" : "Clostridium botulinum toxin A+B+E [Presence] in Specimen"
},
{
"code" : "33696-6",
"display" : "Clostridium botulinum toxin [Presence] in Specimen by Mouse bioassay"
},
{
"code" : "33709-7",
"display" : "Clostridium botulinum toxin A [Presence] in Specimen"
},
{
"code" : "33713-9",
"display" : "Clostridium botulinum toxin B [Presence] in Specimen"
},
{
"code" : "33710-5",
"display" : "Clostridium botulinum toxin E [Presence] in Specimen"
},
{
"code" : "23349-4",
"display" : "Pasteurella multocida toxin [Presence] in Specimen by Immunoassay"
},
{
"code" : "45039-5",
"display" : "Clostridium botulinum toxin [Presence] in Specimen by Immunoassay"
},
{
"code" : "33711-3",
"display" : "Clostridium botulinum toxin F [Presence] in Specimen"
},
{
"code" : "33704-8",
"display" : "Clostridium botulinum toxin A+B+E [Presence] in Specimen by Mouse bioassay neutralization"
},
{
"code" : "33701-4",
"display" : "Clostridium botulinum toxin A [Presence] in Specimen by Mouse bioassay neutralization"
},
{
"code" : "33705-5",
"display" : "Clostridium botulinum toxin B [Presence] in Specimen by Mouse bioassay neutralization"
},
{
"code" : "33702-2",
"display" : "Clostridium botulinum toxin E [Presence] in Specimen by Mouse bioassay neutralization"
},
{
"code" : "38989-0",
"display" : "Clostridium botulinum toxin A+B+E+F+G [Presence] in Specimen by Mouse bioassay neutralization"
},
{
"code" : "63427-9",
"display" : "Escherichia coli Stx1 toxin stx1 gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "63428-7",
"display" : "Escherichia coli Stx2 toxin stx2 gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "71786-8",
"display" : "Staphylococcus aureus exfoliative toxin A eta gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "71787-6",
"display" : "Staphylococcus aureus exfoliative toxin B etb gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "41630-5",
"display" : "Clostridium botulinum toxin A [Presence] in Specimen by Immunofluorescence"
},
{
"code" : "41632-1",
"display" : "Clostridium botulinum toxin B [Presence] in Specimen by Immunofluorescence"
},
{
"code" : "41634-7",
"display" : "Clostridium botulinum toxin E [Presence] in Specimen by Immunofluorescence"
},
{
"code" : "41635-4",
"display" : "Clostridium botulinum toxin F [Presence] in Specimen by Immunofluorescence"
},
{
"code" : "33703-0",
"display" : "Clostridium botulinum toxin F [Presence] in Specimen by Mouse bioassay neutralization"
},
{
"code" : "23935-0",
"display" : "Staphylococcus aureus toxic shock syndrome toxin 1 [Presence] in Specimen"
},
{
"code" : "80518-4",
"display" : "Clostridium baratii toxin F bont gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "81644-7",
"display" : "Clostridium botulinum toxin C botC gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "81645-4",
"display" : "Clostridium botulinum toxin D botD gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "81646-2",
"display" : "Clostridium botulinum toxin E botE gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "81647-0",
"display" : "Clostridium botulinum toxin F botF gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "53943-7",
"display" : "Bacterial cytolethal distending toxin cdt gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "94611-1",
"display" : "Pasteurella multocida toxin toxA gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "41631-3",
"display" : "Clostridium botulinum toxin A botA gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "41633-9",
"display" : "Clostridium botulinum toxin B botB gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "81648-8",
"display" : "Clostridium botulinum toxin G botG gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "44881-1",
"display" : "Staphylococcus aureus toxic shock syndrome toxin gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "53942-9",
"display" : "Vibrio cholerae toxin ctx gene [Presence] in Specimen by NAA with probe detection"
},
{
"code" : "48816-3",
"display" : "Staphylococcus aureus Panton-Valentine leukocidin gene [Presence] in Isolate or Specimen by Molecular genetics method"
}
]
}
]
}
}