MII IG Kerndatensatz-Modul Molekulares Tumorboard
2027.0.0-ballot.1 - Germany

This page is part of the MII Implementation Guide Molecular Tumor Board (v2027.0.0-ballot.1: Release) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

Extension: MII EX MTB Antrag GenomicsStudyAnalysis Metrics

Official URL: https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc Version: 2027.0.0-ballot.1
Active as of 2026-09-15 Computable Name: MII_EX_MTB_GenomicStudyAnalysis_QC

Sequenzierbezogenen Metriken der Genomic Study Analysis

Context of Use

    This extension may be used on the following element(s)

Usage info

Usages:

You can also check for usages in the FHIR IG Statistics

Formal Views of Extension Content

Description of Profiles, Differentials, Snapshots, and their representations.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension MII EX MTB Antrag GenomicsStudyAnalysis Metrics
... Slices for extension Content/Rules for all slices
.... extension:read-depth S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "read-depth"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Depth
.... extension:read-length S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "read-length"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Length
.... extension:sequencing-coverage S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "sequencing-coverage"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Sequencing Coverage
.... extension:metrics-description S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "metrics-description"
..... Slices for value[x] 1..1 string Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueString S 1..1 string Metrics Description
.... extension:sequencing-read-type S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "sequencing-read-type"
..... Slices for value[x] 1..1 CodeableConcept Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueCodeableConcept S 1..1 CodeableConcept Sequencing Read Type
.... extension:gap-statistics S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "gap-statistics"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Gap Statistics
... url 1..1 uri "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc"
... value[x] 0..0 Value of extension

doco Documentation for this format
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension MII EX MTB Antrag GenomicsStudyAnalysis Metrics
... id 0..1 string Unique id for inter-element referencing
... Slices for extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
.... extension:read-depth S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "read-depth"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Depth
.... extension:read-length S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "read-length"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Length
.... extension:sequencing-coverage S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "sequencing-coverage"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Sequencing Coverage
.... extension:metrics-description S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "metrics-description"
..... Slices for value[x] 1..1 string Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueString S 1..1 string Metrics Description
.... extension:sequencing-read-type S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "sequencing-read-type"
..... Slices for value[x] 1..1 CodeableConcept Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueCodeableConcept S 1..1 CodeableConcept Sequencing Read Type
.... extension:gap-statistics S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "gap-statistics"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Gap Statistics
... url 1..1 uri "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc"

doco Documentation for this format

Constraints

Id Grade Path(s) Description Expression
ele-1 error **ALL** elements All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error **ALL** extensions Must have either extensions or value[x], not both extension.exists() != value.exists()

Summary

Complex Extension: Sequenzierbezogenen Metriken der Genomic Study Analysis

  • read-depth: Quantity: An Extension
  • read-length: Quantity: An Extension
  • sequencing-coverage: Quantity: An Extension
  • metrics-description: string: An Extension
  • sequencing-read-type: CodeableConcept: An Extension
  • gap-statistics: Quantity: An Extension

Differential ViewDifferential View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension MII EX MTB Antrag GenomicsStudyAnalysis Metrics
... Slices for extension Content/Rules for all slices
.... extension:read-depth S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "read-depth"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Depth
.... extension:read-length S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "read-length"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Length
.... extension:sequencing-coverage S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "sequencing-coverage"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Sequencing Coverage
.... extension:metrics-description S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "metrics-description"
..... Slices for value[x] 1..1 string Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueString S 1..1 string Metrics Description
.... extension:sequencing-read-type S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "sequencing-read-type"
..... Slices for value[x] 1..1 CodeableConcept Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueCodeableConcept S 1..1 CodeableConcept Sequencing Read Type
.... extension:gap-statistics S 0..1 Extension Extension
..... extension 0..0 Extension
..... url S 1..1 uri "gap-statistics"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Open by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Gap Statistics
... url 1..1 uri "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc"
... value[x] 0..0 Value of extension

doco Documentation for this format

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension MII EX MTB Antrag GenomicsStudyAnalysis Metrics
... id 0..1 string Unique id for inter-element referencing
... Slices for extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
.... extension:read-depth S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "read-depth"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Depth
.... extension:read-length S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "read-length"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Read Length
.... extension:sequencing-coverage S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "sequencing-coverage"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Sequencing Coverage
.... extension:metrics-description S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "metrics-description"
..... Slices for value[x] 1..1 string Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueString S 1..1 string Metrics Description
.... extension:sequencing-read-type S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "sequencing-read-type"
..... Slices for value[x] 1..1 CodeableConcept Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueCodeableConcept S 1..1 CodeableConcept Sequencing Read Type
.... extension:gap-statistics S 0..1 Extension Extension
..... id 0..1 string Unique id for inter-element referencing
..... extension 0..0 Extension
Slice: Unordered, Open by value:url
..... url S 1..1 uri "gap-statistics"
..... Slices for value[x] 1..1 Quantity Value of extension
Slice: Unordered, Closed by type:$this
..... Slices for value[x] Content/Rules for all slices
...... value[x]:valueQuantity S 1..1 Quantity Gap Statistics
... url 1..1 uri "https://www.medizininformatik-initiative.de/fhir/ext/modul-mtb/StructureDefinition/mii-ex-mtb-genomic-study-analysis-qc"

doco Documentation for this format

Constraints

Id Grade Path(s) Description Expression
ele-1 error **ALL** elements All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error **ALL** extensions Must have either extensions or value[x], not both extension.exists() != value.exists()

Summary

Complex Extension: Sequenzierbezogenen Metriken der Genomic Study Analysis

  • read-depth: Quantity: An Extension
  • read-length: Quantity: An Extension
  • sequencing-coverage: Quantity: An Extension
  • metrics-description: string: An Extension
  • sequencing-read-type: CodeableConcept: An Extension
  • gap-statistics: Quantity: An Extension

 

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