Cohort Selector Clinical Domain Agent Since 5.0
This document describes the configuration options available for managing cohort selection settings in the cohortSelector
section of the project configuration file. These settings control how consent data is retrieved and filtered.
Configuration Structure
The cohortSelector
section allows different implementations to be used for selecting the transfer cohort, at the moment there is only one implementation available out-of-the-box: trustCenterAgent
.
yaml
cohortSelector:
trustCenterAgent:
server:
baseUrl: http://tc-agent:8080
domain: MII
patientIdentifierSystem: "https://ths-greifswald.de/fhir/gics/identifiers/Pseudonym"
policySystem: "https://ths-greifswald.de/fhir/CodeSystem/gics/Policy"
policies: [ "IDAT_erheben", "IDAT_speichern_verarbeiten", "MDAT_erheben", "MDAT_speichern_verarbeiten" ]
Fields
trustCenterAgent
Since 5.0
The TCA based implementation uses the connection to the trust center to select patient IDs for transfer.
server
Since 5.0
- Description: Specifies connection settings for the Trust Center Agent server.
- Type:
HttpClientConfig
- Example:yaml
server: baseUrl: http://custom-agent:9000 auth: [ ... ] ssl: [ ... ]
domain
Since 5.0
- Description: Defines the domain to search for consent, serving as a namespace for data segregation.
- Type: String
- Example:yaml
domain: ResearchDomain
patientIdentifierSystem
Since 5.0
- Description: Filters patients based on their identifier system. Only patients with identifiers from this system will be included.
- Type: String
- Example:yaml
patientIdentifierSystem: "https://example.org/fhir/identifiers/Patient"
policySystem
Since 5.0
- Description: Filters policies based on their system identifier. Only policies from this system will be considered valid.
- Type: String
- Example:yaml
policySystem: "https://example.org/fhir/CodeSystem/Policy"
policies
Since 5.0
- Description: Specifies a list of required policies. Consent must explicitly include approval for all these policies to qualify.
- Type: Array of Strings
- Example:yaml
policies: [ "IDAT_view", "MDAT_process" ]
Notes
- The
domain
field should be chosen carefully to avoid overlapping data between namespaces. - The
patientIdentifierSystem
andpolicySystem
fields must reference valid FHIR-based system URLs. - When defining policies, ensure they align with the consent requirements of your organization.