MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
This page is part of the MII IG Kerndatensatz-Modul Biobank (v2027.0.0-ballot: 2027 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. No current official version has been published yet. For a full list of available versions, see the Directory of published versions
<Specimen xmlns="http://hl7.org/fhir">
<id value="AliquotgruppeBuffyCoat"/>
<meta>
<profile
value="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Specimen"/>
</meta>
<language value="de"/>
<text>
<status value="extensions"/>
<div xml:lang="de" lang="de"><hr/><p><b>German</b></p><hr/><p class="res-header-id"><b>Generated Narrative: Specimen AliquotgruppeBuffyCoat</b></p><a name="de-AliquotgruppeBuffyCoat"> </a><a name="de-hcAliquotgruppeBuffyCoat"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px"/><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-mii-pr-biobank-specimen.html">MII PR Biobank Specimen Bioprobe</a></p></div><p><b>MII EX Biobank Ebene</b>: <a href="CodeSystem-mii-cs-biobank-probenebene.html#mii-cs-biobank-probenebene-ALIQUOTGRUPPE">MII CS Biobank Probenebene: ALIQUOTGRUPPE</a> (Aliquotgruppe)</p><p><b>MII EX Biobank Anzahl Aliquots</b>: 1</p><p><b>identifier</b>: <code>https://biobank.uk-musterstadt.de/fhir/sid/proben</code>/12345-BC</p><p><b>status</b>: Available</p><p><b>type</b>: <span title="Codes:{http://snomed.info/sct 258587000}, {https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs BuffyCoat}">Buffy coat (specimen)</span></p><p><b>subject</b>: <a href="https://simplifier.net/resolve?scope=de.basisprofil.r4@1.6.0&canonical=http://fhir.org/packages/de.basisprofil.r4/Patient/mii-exa-test-data-patient-1">Patient/mii-exa-test-data-patient-1</a></p><p><b>parent</b>: <a href="Specimen-MusterprobeFluessig.html">Specimen: extension = Primärprobe (MII CS Biobank Probenebene#PRIMÄRPROBE),->Organization Mustersammlung; identifier = https://biobank.uk-musterstadt.de/fhir/sid/proben#12345; status = available; type = Venous blood specimen (specimen); receivedTime = 2018-06-07 15:50:00+0100</a></p><h3>Collections</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Collected[x]</b></td></tr><tr><td style="display: none">*</td><td>2018-06-07 15:54:00+0100</td></tr></table><blockquote><p><b>processing</b></p><p><b>MII EX Biobank Temperaturbedingungen</b>: 15-25 °C</p><p><b>Sample storage temperature</b>: <span title="Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs RT}">Room temperature</span></p><p><b>procedure</b>: <span title="Codes:{http://snomed.info/sct 1186936003}">Storage of specimen (procedure)</span></p><p><b>time</b>: 2018-06-07 16:37:00+0100 --> 2018-06-07 17:07:00+0100</p></blockquote><blockquote><p><b>processing</b></p><p><b>MII EX Biobank Temperaturbedingungen</b>: -196--150 °C</p><p><b>Sample storage temperature</b>: <span title="Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs LN}">liquid nitrogen, -150 to -196 degrees Celsius</span></p><p><b>procedure</b>: <span title="Codes:{http://snomed.info/sct 1186936003}">Storage of specimen (procedure)</span></p><p><b>time</b>: 2018-06-07 17:07:00+0100 --> (ongoing)</p></blockquote><h3>Containers</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Type</b></td><td><b>Capacity</b></td><td><b>SpecimenQuantity</b></td></tr><tr><td style="display: none">*</td><td><span title="Codes:{http://snomed.info/sct 83059008}">Tube, device (physical object)</span></td><td>2 ml<span style="background: LightGoldenRodYellow"> (Details: UCUM codeml = 'ml')</span></td><td>0.2 ml<span style="background: LightGoldenRodYellow"> (Details: UCUM codeml = 'ml')</span></td></tr></table><p><b>note</b>: </p><blockquote><div><p>Buffy-Coat Aliquots für Genomik-Analysen</p>
</div></blockquote></div>
</text>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-ebene">
<valueCoding>
<system
value="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/CodeSystem/mii-cs-biobank-probenebene"/>
<code value="ALIQUOTGRUPPE"/>
<display value="Aliquotgruppe"/>
</valueCoding>
</extension>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-anzahl-aliquots">
<valueInteger value="1"/>
</extension>
<identifier>
<system value="https://biobank.uk-musterstadt.de/fhir/sid/proben"/>
<value value="12345-BC"/>
</identifier>
<status value="available"/>
<type>
<coding>
<system value="http://snomed.info/sct"/>
<code value="258587000"/>
<display value="Buffy coat (specimen)"/>
</coding>
<coding>
<system
value="https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs"/>
<code value="BuffyCoat"/>
<display value="Buffy coat"/>
</coding>
</type>
<subject>
<reference value="Patient/mii-exa-test-data-patient-1"/>
</subject>
<parent>🔗
<reference value="Specimen/MusterprobeFluessig"/>
</parent>
<collection>
<collectedDateTime value="2018-06-07T15:54:00+01:00"/>
</collection>
<processing>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen">
<valueRange>
<low>
<value value="15"/>
<unit value="°C"/>
<system value="http://unitsofmeasure.org"/>
<code value="Cel"/>
</low>
<high>
<value value="25"/>
<unit value="°C"/>
<system value="http://unitsofmeasure.org"/>
<code value="Cel"/>
</high>
</valueRange>
</extension>
<extension
url="https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-storage-temperature-extension">
<valueCodeableConcept>
<coding>
<system
value="https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs"/>
<code value="RT"/>
<display value="Room temperature"/>
</coding>
</valueCodeableConcept>
</extension>
<procedure>
<coding>
<system value="http://snomed.info/sct"/>
<code value="1186936003"/>
<display value="Storage of specimen (procedure)"/>
</coding>
</procedure>
<timePeriod>
<start value="2018-06-07T16:37:00+01:00"/>
<end value="2018-06-07T17:07:00+01:00"/>
</timePeriod>
</processing>
<processing>
<extension
url="https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen">
<valueRange>
<low>
<value value="-196"/>
<unit value="°C"/>
<system value="http://unitsofmeasure.org"/>
<code value="Cel"/>
</low>
<high>
<value value="-150"/>
<unit value="°C"/>
<system value="http://unitsofmeasure.org"/>
<code value="Cel"/>
</high>
</valueRange>
</extension>
<extension
url="https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-storage-temperature-extension">
<valueCodeableConcept>
<coding>
<system
value="https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs"/>
<code value="LN"/>
</coding>
</valueCodeableConcept>
</extension>
<procedure>
<coding>
<system value="http://snomed.info/sct"/>
<code value="1186936003"/>
<display value="Storage of specimen (procedure)"/>
</coding>
</procedure>
<timePeriod>
<start value="2018-06-07T17:07:00+01:00"/>
</timePeriod>
</processing>
<container>
<type>
<coding>
<system value="http://snomed.info/sct"/>
<code value="83059008"/>
<display value="Tube, device (physical object)"/>
</coding>
</type>
<capacity>
<value value="2"/>
<unit value="ml"/>
<system value="http://unitsofmeasure.org"/>
<code value="ml"/>
</capacity>
<specimenQuantity>
<value value="0.2"/>
<unit value="ml"/>
<system value="http://unitsofmeasure.org"/>
<code value="ml"/>
</specimenQuantity>
</container>
<note>
<text value="Buffy-Coat Aliquots für Genomik-Analysen"/>
</note>
</Specimen>