MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
MII IG Kerndatensatz-Modul Biobank
2027.0.0-ballot -
Germany
This page is part of the MII IG Kerndatensatz-Modul Biobank (v2027.0.0-ballot: 2027 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. No current official version has been published yet. For a full list of available versions, see the Directory of published versions
{
"resourceType" : "Specimen",
"id" : "AliquotgruppeDNA",
"meta" : {
"profile" : [
🔗 "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Specimen"
]
},
"language" : "de",
"text" : {
"status" : "extensions",
"div" : "<div xml:lang=\"de\" lang=\"de\"><hr/><p><b>German</b></p><hr/><p class=\"res-header-id\"><b>Generated Narrative: Specimen AliquotgruppeDNA</b></p><a name=\"de-AliquotgruppeDNA\"> </a><a name=\"de-hcAliquotgruppeDNA\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-mii-pr-biobank-specimen.html\">MII PR Biobank Specimen Bioprobe</a></p></div><p><b>MII EX Biobank Ebene</b>: <a href=\"CodeSystem-mii-cs-biobank-probenebene.html#mii-cs-biobank-probenebene-ALIQUOTGRUPPE\">MII CS Biobank Probenebene: ALIQUOTGRUPPE</a> (Aliquotgruppe)</p><p><b>MII EX Biobank Anzahl Aliquots</b>: 2</p><p><b>identifier</b>: <code>https://biobank.uk-musterstadt.de/fhir/sid/proben</code>/12345-DNA-1</p><p><b>status</b>: Available</p><p><b>type</b>: <span title=\"Codes:{http://snomed.info/sct 258566005}, {https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs DNA}\">Deoxyribonucleic acid specimen (specimen)</span></p><p><b>subject</b>: <a href=\"https://simplifier.net/resolve?scope=de.basisprofil.r4@1.6.0&canonical=http://fhir.org/packages/de.basisprofil.r4/Patient/mii-exa-test-data-patient-1\">Patient/mii-exa-test-data-patient-1</a></p><p><b>parent</b>: <a href=\"Specimen-AliquotBuffyCoat2.html\">Specimen: extension = Aliquot (MII CS Biobank Probenebene#ALIQUOT); identifier = https://biobank.uk-musterstadt.de/fhir/sid/proben#12345-BC-2; status = unavailable; type = Buffy coat (specimen)</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td></tr><tr><td style=\"display: none\">*</td><td>2018-06-07 15:54:00+0100</td></tr></table><blockquote><p><b>processing</b></p><p><b>MII EX Biobank Temperaturbedingungen</b>: -80--70 °C</p><p><b>Sample storage temperature</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs -60to-85}\">between -60 and -85 degrees Celsius</span></p><p><b>procedure</b>: <span title=\"Codes:{http://snomed.info/sct 1186936003}\">Storage of specimen (procedure)</span></p><p><b>time</b>: 2018-09-07 13:55:00+0100 --> (ongoing)</p></blockquote><h3>Containers</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Type</b></td><td><b>Capacity</b></td><td><b>SpecimenQuantity</b></td></tr><tr><td style=\"display: none\">*</td><td><span title=\"Codes:{http://snomed.info/sct 83059008}\">Tube, device (physical object)</span></td><td>0.5 ml<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM codeml = 'ml')</span></td><td>0.05 ml<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM codeml = 'ml')</span></td></tr></table><p><b>note</b>: </p><blockquote><div><p>DNA Aliquots gewonnen aus Buffy-Coat</p>\n</div></blockquote></div>"
},
"extension" : [
{
"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-ebene",
"valueCoding" : {
"system" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/CodeSystem/mii-cs-biobank-probenebene",
"code" : "ALIQUOTGRUPPE",
"display" : "Aliquotgruppe"
}
},
{
"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-anzahl-aliquots",
"valueInteger" : 2
}
],
"identifier" : [
{
"system" : "https://biobank.uk-musterstadt.de/fhir/sid/proben",
"value" : "12345-DNA-1"
}
],
"status" : "available",
"type" : {
"coding" : [
{
"system" : "http://snomed.info/sct",
"code" : "258566005",
"display" : "Deoxyribonucleic acid specimen (specimen)"
},
{
"system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-cs",
"code" : "DNA",
"display" : "DNA"
}
]
},
"subject" : {
"reference" : "Patient/mii-exa-test-data-patient-1"
},
"parent" : [
{
🔗 "reference" : "Specimen/AliquotBuffyCoat2"
}
],
"collection" : {
"collectedDateTime" : "2018-06-07T15:54:00+01:00"
},
"processing" : [
{
"extension" : [
{
"url" : "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/Temperaturbedingungen",
"valueRange" : {
"low" : {
"value" : -80,
"unit" : "°C",
"system" : "http://unitsofmeasure.org",
"code" : "Cel"
},
"high" : {
"value" : -70,
"unit" : "°C",
"system" : "http://unitsofmeasure.org",
"code" : "Cel"
}
}
},
{
"url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-storage-temperature-extension",
"valueCodeableConcept" : {
"coding" : [
{
"system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-storage-temperature-cs",
"code" : "-60to-85",
"display" : "between -60 and -85 degrees Celsius"
}
]
}
}
],
"procedure" : {
"coding" : [
{
"system" : "http://snomed.info/sct",
"code" : "1186936003",
"display" : "Storage of specimen (procedure)"
}
]
},
"timePeriod" : {
"start" : "2018-09-07T13:55:00+01:00"
}
}
],
"container" : [
{
"type" : {
"coding" : [
{
"system" : "http://snomed.info/sct",
"code" : "83059008",
"display" : "Tube, device (physical object)"
}
]
},
"capacity" : {
"value" : 0.5,
"unit" : "ml",
"system" : "http://unitsofmeasure.org",
"code" : "ml"
},
"specimenQuantity" : {
"value" : 0.05,
"unit" : "ml",
"system" : "http://unitsofmeasure.org",
"code" : "ml"
}
}
],
"note" : [
{
"text" : "DNA Aliquots gewonnen aus Buffy-Coat"
}
]
}